PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGMP3347
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Subtree rooted at node 135: /----- ORGLA05G0041400.1 [Oryza glaberrima] (2) /-64-+ | \----- OBART05G04450.1 [Oryza barthii] (40) | | /----- ONIVA05G04820.1 [Oryza nivara] (8) | | | |----- LOC_Os05g07120.1 [Oryza sativa japonica] (21) /-55-+-80-+ | | |----- BGIOSGA019238-PA [Oryza sativa indica] (39) | | | | | \----- ORUFI05G04670.1 [Oryza rufipogon] (76) | | /--51-+ \---------- OGLUM05G04370.1 [Oryza glumaepatula] (67) | | | |--------------- OMERI05G04410.1 [Oryza meridionalis] (24) /-100+ | | | \--------------- KN538867.1_FGP022 [Oryza longistaminata] (60) | | /-100+ \--------------------- OPUNC05G04080.1 [Oryza punctata] (32) | | | \-------------------------- LPERR05G03980.1 [Leersia perrieri] (16) | | /----- GRMZM2G369629_P01 [Zea mays] (10) | /------100------+ | | \----- Sobic.009G057000.2.p [Sorghum bicolor] (29) | | | | /---------- Do000953.1 [Dichanthelium oligosanthes] (12) /-86-+ | | | | /-100+ /-99-+ /----- Sevir.7G284000.1.p [Setaria viridis] (37) | | | | | \-100+ | | | | | \----- Seita.7G273100.1.p [Setaria italica] (48) | | | | | | | | \-100-+--------------- Pavir.9KG226700.1.p [Panicum virgatum] (18) | | | | | | | | /----- Pahal.C01473.1 [Panicum hallii] (42) | | | \---100---+ | \-100+ \----- Pavir.3KG185200.1.p [Panicum virgatum] (52) | | | | /----- Zjn_sc00024.1.g01570.1.am.mk [Zoysia japonica] (20) | | /-97-+ | | | \----- Zmw_sc00361.1.g00090.1 [Zoysia matrella] (23) /-100+ | /-100+ | | | | \---------- Zpz_sc01263.1.g00030.1.am.mk [Zoysia pacifica] (68) | | \----100---+ | | \--------------- Oropetium_20150105_03041A [Oropetium thomaeum] (27) | | | | /----- MLOC_69121.2 [Hordeum vulgare] (7) | | /----96---+ | | | \----- Traes_1BS_1F372BED3.1 [Triticum aestivum] (14) | | | | | /-100-+ /----- EMT17812 [Aegilops tauschii] (26) | | | | /-100+ /-100+ | | | | \----- Traes_1DS_CD79239C8.1 [Triticum aestivum] (57) | | | | \-95-+ | | | | | /----- Traes_1AS_96F0745A2.1 [Triticum aestivum] (45) | | \------100-----+ \-100+ | | | \----- TRIUR3_12818-P1 [Triticum urartu] (77) | | | | | | /----- Brast08G193000.1.p [Brachypodium stacei] (28) | | \------100------+ | | \----- Bradi2g34600.1.p [Brachypodium distachyon] (35) | | | | /----- PH01000431G0060 [Phyllostachys heterocycla] (17) /--90-+ \----------------100----------------+ | | \----- PH01001110G0250 [Phyllostachys heterocycla] (31) | | | | /----- PDK_30s765181g004 [Phoenix dactylifera] (11) | | /---100---+ | | | \----- XP_010920800.1 [Elaeis guineensis] (64) | | | | | /--91-+ /---------- XP_010908560.1 [Elaeis guineensis] (34) | | | | | | | | \-100+ /----- PEQU_19165 [Phalaenopsis equestris] (63) | \-----------100----------+ \-84-+ | | \----- GSMUA_Achr5P29390_001 [Musa acuminata] (73) | | | \--------------------- Aco025362.1 [Ananas comosus] (78) | | /--------------------- OPUNC01G03610.1 [Oryza punctata] (19) | | | | /---------- OMERI01G03850.1 [Oryza meridionalis] (33) | | | | | | /----- ONIVA01G04390.1 [Oryza nivara] (36) /-65-+ | /-63-+ | | | /-100+ | | |----- ORUFI01G04050.1 [Oryza rufipogon] (51) | | | | | \-82-+ | | | | | |----- BGIOSGA002833-PA [Oryza sativa indica] (61) | | | | | | | | | | | \----- LOC_Os01g06640.1 [Oryza sativa japonica] (69) | | | | | | | | \--95-+ /----- OBART01G03950.1 [Oryza barthii] (38) | | /-93-+ |---100---+ | | | | | \----- ORGLA01G0034700.1 [Oryza glaberrima] (72) | | | | | | | | | |--------------- KN539819.1_FGP007 [Oryza longistaminata] (41) | | | | | | |---------100--------+ | \--------------- OGLUM01G04250.1 [Oryza glumaepatula] (44) | | | | | | | \-------------------------- OB01G13800.1 [Oryza brachyantha] (66) | | | /-61-+ | \------------------------------- LPERR01G03590.1 [Leersia perrieri] (43) | | | | | \---------------------------------------------------- PH01000098G0880 [Phyllostachys heterocycla] (49) | | | | /--------------------- Do005067.1 [Dichanthelium oligosanthes] (3) | | | | | | /----- Seita.5G113600.1.p [Setaria italica] (5) | | /-100+ /---100---+ | | | | | \----- Sevir.5G110300.1.p [Setaria viridis] (15) | | | | | | | | \--95-+ /----- Pavir.5NG084000.1.p [Panicum virgatum] (6) | | | | /-100+ | | /-100+ | | \----- Pavir.5KG079600.1.p [Panicum virgatum] (56) | | | | \-100+ | | | | \---------- Pahal.E04069.1 [Panicum hallii] (58) | | | | --100+ \-----------100-----------+ | /----- Sobic.003G061400.1.p [Sorghum bicolor] (54) | | \---------100--------+ | | \----- GRMZM2G088443_P01 [Zea mays] (55) | | | \------------------------------- 462933244 [Eragrostis tef] (71) | | /--------------- EMT18461 [Aegilops tauschii] (4) | | | | /----- TRAES3BF130100030CFD_t1 [Triticum aestivum] (53) | /--68-+ /-100+ | | | | \----- Traes_3B_2DF1A6E5B.1 [Triticum aestivum] (62) | | \-76-+ | | | /----- TRIUR3_21807-P1 [Triticum urartu] (74) | /-74-+ \-81-+ | | | \----- TRIUR3_07421-P1 [Triticum urartu] (75) | | | \-----------------74----------------+ \--------------------- EMT01225 [Aegilops tauschii] (47) | | /----- Brast01G375800.1.p [Brachypodium stacei] (50) \---------100--------+ \----- Bradi2g03830.2.p [Brachypodium distachyon] (59) Root part of tree: /------------------------------------------------------------------- Zpz_sc00047.1.g00090.1.am.mk [Zoysia pacifica] (1) | |------------------------------------------------------------------- Zmw_sc02503.1.g00010.1 [Zoysia matrella] (65) | | /--------------------------------- (135) | | | | /----------- Zjn_sc00005.1.g05330.1.am.mk [Zoysia japonica] (13) + /-----98----+ /----100---+ | | | | \----------- Zmw_sc01100.1.g00040.1 [Zoysia matrella] (22) | | \----100---+ | | | /----------- Zmw_sc01326.1.g00100.1 [Zoysia matrella] (25) | /----100---+ \----100---+ | | | \----------- Zpz_sc00036.1.g00350.1.am.mk [Zoysia pacifica] (46) | | | \----74----+ \--------------------------------------------- Oropetium_20150105_07180A [Oropetium thomaeum] (70) | | /----------- Zjn_sc00011.1.g04920.1.am.mk [Zoysia japonica] (9) \---------------------99---------------------+ \----------- Zmw_sc04354.1.g00020.1 [Zoysia matrella] (30) |