PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_3B_2DF1A6E5B.1
Organism
Triticum aestivum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 197aa    MW: 21139.1 Da    PI: 9.0502
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_3B_2DF1A6E5B.1genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH32.91.2e-1068114455
                           HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                   HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                            h+e+ErrRR riN  +  Lr+++P       k ++Ka+ L ++v+ +k+L+
  Traes_3B_2DF1A6E5B.1  68 VHSEAERRRRVRINAHLTALRRMIPDT-----KQMDKAALLARVVDQVKHLK 114
                           59************************9.....67***************995 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088814.08764113IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.107.5E-1367125IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474593.66E-1368135IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.7E-868113IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000833.73E-1169115No hitNo description
SMARTSM003533.1E-1070119IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:3.30.70.2603.2E-4152193No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 197 aa     Download sequence    Send to blast
MAAPCQSPQG GNELMAYDAC YPTVSGGPAL LPRQASSAPP AGPPELSTTS SSTTGSGRTA  60
TEARALKVHS EAERRRRVRI NAHLTALRRM IPDTKQMDKA ALLARVVDQV KHLKRRAGEA  120
AQQTPAVPPE TDEVSIEFCA GDNDSRLYMK ASVSCDDRPD LVAGLIQALH GLRLRTVRAE  180
VTSLGGRVQH VFTLCKE
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG6703061e-166HG670306.1 Triticum aestivum chromosome 3B, genomic scaffold, cultivar Chinese Spring.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020191744.11e-116putative transcription factor bHLH107 isoform X1
TrEMBLA0A3B6FHP11e-141A0A3B6FHP1_WHEAT; Uncharacterized protein
TrEMBLA0A446PFD21e-141A0A446PFD2_TRITD; Uncharacterized protein
STRINGTraes_3B_2DF1A6E5B.11e-142(Triticum aestivum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP33473678
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56770.19e-33bHLH family protein