PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM4340
Phylogenetic tree for protein ? help Back to Top |
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Subtree rooted at node 98: /----- 478469 [Arabidopsis lyrata] (2) /-100+ | \----- Araha.33366s0002.1.p [Arabidopsis halleri] (13) /----100---+ | \---------- AT3G11280.1 [Arabidopsis thaliana] (33) | | /----- Csa15g015020.1 [Camelina sativa] (38) | /-100+ /-100+ | \----- Csa19g015330.1 [Camelina sativa] (41) | | /-100+ | | | | /----- Carubv10014411m [Capsella rubella] (47) | | | \-100+ /--------------59--------------+ \-100-+ \----- Cagra.1655s0043.1.p [Capsella grandiflora] (49) | | | | | \--------------- Bostr.19424s1061.1.p [Boechera stricta] (50) | | | \-------------------------- Thhalv10021322m [Eutrema salsugineum] (12) | | /-------------------------- Thhalv10014370m [Eutrema salsugineum] (3) | | | | /----- GSBRNA2T00106967001 [Brassica napus] (4) | | /-100+ | | | \----- XP_013608729.1 [Brassica oleracea] (16) | | | | /-50-+ /-100+---------- GSBRNA2T00136239001 [Brassica napus] (6) | | | | | | | | | \---------- XP_009122177.1 [Brassica rapa] (29) | | | /-100-+ | | | | | /----- RrC5876_p2 [Raphanus raphanistrum] (17) | /-99-+ | | \----93---+ | | | \-100+ \----- Rsa1.0_00570.1_g00010.1 [Raphanus sativus] (21) | | | | | | | \--------------------- 676738208 [Sisymbrium irio] (27) | /-98-+ | | | | \------------------------------- Tp6g37110 [Thellungiella parvula] (26) | | | | | \------------------------------------ KFK25008.1 [Arabis alpina] (24) | | | | /----- 908494 [Arabidopsis lyrata] (8) | | /-100+ | /-100+ | \----- Araha.0620s0006.1.p [Arabidopsis halleri] (25) | | | /----100---+ /-92-+ | | | \---------- AT5G05790.1 [Arabidopsis thaliana] (39) | | | | | | | | | | /----- Csa13g007800.1 [Camelina sativa] (10) | | | | | /-95-+ | | | \--------100--------+ | \----- Csa20g008050.1 [Camelina sativa] (14) | | | | /-100+ | | | | | \---------- Csa08g058690.1 [Camelina sativa] (54) | | | | | | | | \-100-+ /----- Carubv10001695m [Capsella rubella] (35) | | | | /-100+ | | | | | \----- Cagra.5131s0007.1.p [Capsella grandiflora] (56) | | | \-67-+ | | | \---------- Bostr.13129s0394.1.p [Boechera stricta] (48) | | | | | | /----- evm.model.supercontig_19.217 [Carica papaya] (5) | | | /---------100--------+ | | /-100-+ | \----- evm.model.supercontig_19.216 [Carica papaya] (9) | | | | | | | | | | /----- Gh_D04G0641 [Gossypium hirsutum] (11) | | | | | /-77-+ | | | | | | \----- Gorai.012G075600.1 [Gossypium raimondii] (32) | | | | /-94-+ /-100+ --89-+ | | | | | | | /----- Gh_A05G3011 [Gossypium hirsutum] (28) | | | | | | | \-99-+ | | | | | | /-100-+ \----- Cotton_A_25218_BGI-A2_v1.0 [Gossypium arboreum] (43) | | | | | | | | | | | | | | | | /----- Cotton_A_13554_BGI-A2_v1.0 [Gossypium arboreum] (37) | | | | | \-100+ \---100---+ | | | | /-100+ | \----- Gorai.011G279800.1 [Gossypium raimondii] (45) | \-74-+ | | | | | | | | | \--------------------- Thecc1EG042604t1 [Theobroma cacao] (31) | | | | | | | | | | /---------- orange1.1g023196m [Citrus sinensis] (23) | | | | | | | | \----99---+ \---------100--------+ /----- EcS776745.10 [Eucalyptus camaldulensis] (40) | | | \-100+ | | | \----- Eucgr.G03029.1.p [Eucalyptus grandis] (46) | | | | | | /----- XP_010543747.1 [Tarenaya hassleriana] (15) | | \--------------100-------------+ | | \----- XP_010552868.1 [Tarenaya hassleriana] (20) | | | \---------------------------------------------------- AA52G00002 [Aethionema arabicum] (57) | \-------------------------------------------------------------- Tp3g09550 [Thellungiella parvula] (34) Root part of tree: /------------------------------------------------------------------- GSBRNA2T00060285001 [Brassica napus] (1) | |------------------------------------------------------------------- XP_009122287.1 [Brassica rapa] (18) | | /------------------------------------------ (98) | | | | /-------- XP_013583693.1 [Brassica oleracea] (30) | | /---100--+ | | | \-------- GSBRNA2T00111031001 [Brassica napus] (51) | | /--100--+ + /--100--+ | | /-------- XP_009146740.1 [Brassica rapa] (53) | | | | \---100--+ | | | /--100--+ \-------- GSBRNA2T00000318001 [Brassica napus] (55) | | | | | | | | | | /-------- Rsa1.0_00784.1_g00009.1 [Raphanus sativus] (44) | /---53---+ \---100--+ \-------100------+ | | | | \-------- RrC434_p7 [Raphanus raphanistrum] (52) | | | | | | | \--------------------------------- 676727942 [Sisymbrium irio] (36) | | | \---66--+ \-------------------------------------------------- XP_013622117.1 [Brassica oleracea] (7) | | /----------------- GSBRNA2T00060303001 [Brassica napus] (19) | | \--------------------99-------------------+ /-------- Rsa1.0_00025.1_g00052.1 [Raphanus sativus] (22) \---100--+ \-------- RrC19221_p1 [Raphanus raphanistrum] (42) |