PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM1480
Phylogenetic tree for protein ? help Back to Top |
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Subtree rooted at node 130: /---------- Araha.12970s0008.1.p [Arabidopsis halleri] (2) | |---------- 903128 [Arabidopsis lyrata] (3) | | /----- Cagra.0716s0005.1.p [Capsella grandiflora] (11) |-100+ | \----- Carubv10024251m [Capsella rubella] (19) | /----65----+---------- Csa04g052850.1 [Camelina sativa] (20) | | | |---------- Bostr.23794s0182.1.p [Boechera stricta] (23) | | | |---------- AT2G38880.8 [Arabidopsis thaliana] (52) | | | | /----- Csa06g042820.1 [Camelina sativa] (79) | \-80-+ | \----- Csa05g014420.1 [Camelina sativa] (82) | | /----- GSBRNA2T00079089001 [Brassica napus] (7) /-64-+ /-100+ | | | \----- GSBRNA2T00124805001 [Brassica napus] (34) | | /-100+ | | | \---------- XP_009133309.1 [Brassica rapa] (40) | | | | | | /---------- GSBRNA2T00116872001 [Brassica napus] (22) | | | | | | | | /----- RrC3704_p3 [Raphanus raphanistrum] (41) | | | |-74-+ | | | | \----- KFK36791.1 [Arabis alpina] (58) | | |-51-+ /-64-+ \--51-+ |---------- XP_013633986.1 [Brassica oleracea] (88) | | | | | | | |---------- XP_009143352.1 [Brassica rapa] (90) | | | | | | | \---------- GSBRNA2T00152863001 [Brassica napus] (93) | | | /-64-+ | |--------------- Tp4g21270 [Thellungiella parvula] (55) | | | | | | | \--------------- Thhalv10017396m [Eutrema salsugineum] (67) | | | /-100+ | \-------------------------- AA216G00006 [Aethionema arabicum] (50) | | | | | \------------------------------- XP_010554540.1 [Tarenaya hassleriana] (56) /-100+ | | | \------------------------------------ RrC1214_p2 [Raphanus raphanistrum] (24) | | | \----------------------------------------- evm.model.supercontig_1.264 [Carica papaya] (4) | | /----- Cotton_A_21066_BGI-A2_v1.0 [Gossypium arboreum] (9) | | | |----- Gh_A05G2567 [Gossypium hirsutum] (49) | /---100---+ | | |----- Gorai.009G315600.1 [Gossypium raimondii] (62) | | | | | \----- Gh_D05G2854 [Gossypium hirsutum] (69) /-100-+ /--60-+ | | | | /----- Gh_A10G1859 [Gossypium hirsutum] (14) | | | | /-100+ | | | | | \----- Cotton_A_23424_BGI-A2_v1.0 [Gossypium arboreum] (65) | | | \-100+ | | /-100+ | /----- Gorai.011G241600.1 [Gossypium raimondii] (33) | | | | \-95-+ | | | | \----- Gh_D10G2122 [Gossypium hirsutum] (71) | | /-66-+ | | | | | \--------------------- Thecc1EG043066t1 [Theobroma cacao] (18) | | | | /-100+ | | \-------------------------- XP_010520132.1 [Tarenaya hassleriana] (70) | | \------97------+ | | | /----- orange1.1g030547m [Citrus sinensis] (46) | | | /-100+ | | | | \----- Ciclev10032893m [Citrus clementina] (84) | | \---------100--------+ /-100+ | | /----- Neem_4906_f_1 [Azadirachta indica] (60) | | | \-100+ | | | \----- Neem_19782_f_1 [Azadirachta indica] (61) | | | | | \---------------------------------------------------- Eucgr.G02796.1.p [Eucalyptus grandis] (21) | | | \--------------------------------------------------------- Eucgr.A01179.1.p [Eucalyptus grandis] (48) | | /----- Neem_27032_f_1 [Azadirachta indica] (8) | /---------100--------+ | | \----- Neem_9242_f_1 [Azadirachta indica] (43) --91-+ | | | /---------- Gh_D01G2107 [Gossypium hirsutum] (10) | | | | | /-100+ /----- Gh_A01G1864 [Gossypium hirsutum] (13) | /-89-+ | | | | | | | \-57-+----- Gorai.002G250600.1 [Gossypium raimondii] (74) | | | | | | | | /--79-+ \----- Cotton_A_00435_BGI-A2_v1.0 [Gossypium arboreum] (86) | | | | | | | | | | /----- Gorai.007G374600.1 [Gossypium raimondii] (36) \--------------89--------------+ \-64-+ \----97---+ | | \----- Gh_A11G2900 [Gossypium hirsutum] (63) | | | \--------------------- Thecc1EG022083t1 [Theobroma cacao] (87) | | /----- orange1.1g030627m [Citrus sinensis] (51) \-----------100-----------+ \----- Ciclev10012920m [Citrus clementina] (77) Root part of tree: /------------------------------------------------------------------- XP_009133115.1 [Brassica rapa] (1) | |------------------------------------------------------------------- GSBRNA2T00086075001 [Brassica napus] (72) | | /------------------------------------------- (130) | | | | /------------------ Bostr.11793s0061.1.p [Boechera stricta] (5) | | | | | | /------ Cagra.0612s0059.1.p [Capsella grandiflora] (15) | | |-----92----+ | | | \------ Carubv10018752m [Capsella rubella] (39) | | /--93-+ | | | | /------ Csa09g061650.1 [Camelina sativa] (54) | | | | /--99-+ | | | | | \------ Csa06g027800.1 [Camelina sativa] (92) | /--76-+ | \-100-+ | | | /-----100----+ \------------ Csa04g039370.1 [Camelina sativa] (91) | | | | | | | | | | /------ 906721 [Arabidopsis lyrata] (17) | | | | | /--99-+ | | | | | | \------ Araha.11825s0005.1.p [Arabidopsis halleri] (94) | | | | \-----80----+ | | | | \------------ AT3G53340.1 [Arabidopsis thaliana] (26) | | | | | | | | /------------ GSBRNA2T00109108001 [Brassica napus] (6) | | \-100-+ | | | | | /------ GSBRNA2T00129475001 [Brassica napus] (16) | | | /--79-+--88-+ | | | | | \------ XP_009116027.1 [Brassica rapa] (44) | | | | | | | | /-100-+ \------------ XP_013602373.1 [Brassica oleracea] (75) | | | | | | | | /-100-+ \------------------ Rsa1.0_01134.1_g00010.1 [Raphanus sativus] (64) | | | | | | | \--100-+ \------------------------ 676731724 [Sisymbrium irio] (45) | | | | | \------------------------------ Thhalv10010755m [Eutrema salsugineum] (85) | | + | /------------ Csa06g039740.1 [Camelina sativa] (12) | | | | | /-------100-------+ /------ Csa04g050630.1 [Camelina sativa] (30) | | | \--53-+ | | | \------ Csa05g016790.1 [Camelina sativa] (35) | | | | | | /------------------ XP_009141626.1 [Brassica rapa] (27) | | | | | | | | /------ GSBRNA2T00005462001 [Brassica napus] (29) | /--71-+ | /-100-+ /-100-+ | | |--------65--------+ | | | \------ GSBRNA2T00025985001 [Brassica napus] (78) | | | | | \-100-+ | | | |-100-+ \------------ GSBRNA2T00005464001 [Brassica napus] (76) | | | | | | | | | \------------------------ XP_013632258.1 [Brassica oleracea] (42) | | | | | | | | /------ Cagra.0666s0039.1.p [Capsella grandiflora] (59) | | | \-----------58----------+ | | | \------ Carubv10024343m [Capsella rubella] (81) | | | | | | /------------------ AA60G00072 [Aethionema arabicum] (25) | | | | | | | | /------ XP_010528119.1 [Tarenaya hassleriana] (32) | | |--------------69--------------+ /--53-+ | | | | | \------ XP_010529728.1 [Tarenaya hassleriana] (68) | | | \--78-+ | | | \------------ XP_010554935.1 [Tarenaya hassleriana] (80) | | | | /--55-+ | /------ AT2G37060.1 [Arabidopsis thaliana] (28) | | | | | | | | |--------------------93--------------------+------ Araha.13521s0002.1.p [Arabidopsis halleri] (37) | | | | | | | | | \------ 902841 [Arabidopsis lyrata] (89) | | | | | | | |------------------------------------------------- Bostr.23794s0383.1.p [Boechera stricta] (38) | | | | | | | |------------------------------------------------- Tp4g19380 [Thellungiella parvula] (53) | | | | \--84-+ | |------------------------------------------------- 676708170 [Sisymbrium irio] (57) | | | | | \------------------------------------------------- Thhalv10017301m [Eutrema salsugineum] (73) | | | | /------ GSBRNA2T00132524001 [Brassica napus] (31) | |-----------------------100----------------------+ | | \------ XP_013625677.1 [Brassica oleracea] (47) | | | \------------------------------------------------------- Rsa1.0_02873.1_g00002.1 [Raphanus sativus] (83) | \------------------------------------------------------------- RrC2196_p2 [Raphanus raphanistrum] (66) |