PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Phylogenetic Tree for OGEM6003
Phylogenetic tree for protein ? help Back to Top |
---|
Subtree rooted at node 85: /----- Neem_11616_f_3 [Azadirachta indica] (2) /-100+ | \----- Neem_37436_f_1 [Azadirachta indica] (28) /----100---+ | | /----- Ciclev10018041m [Citrus clementina] (14) | \-100+ | \----- orange1.1g018790m [Citrus sinensis] (32) | | /---------- Gh_D09G0232 [Gossypium hirsutum] (5) /-100+ | | | |---------- Gorai.006G027400.1 [Gossypium raimondii] (12) | | /-100+ | | | | /----- Gh_A09G0237 [Gossypium hirsutum] (13) | | | \-100+ /--------100--------+ \-100-+ \----- Cotton_A_29266_BGI-A2_v1.0 [Gossypium arboreum] (36) | | | | | \--------------- Thecc1EG017926t1 [Theobroma cacao] (44) | | | \-------------------------- XP_010550096.1 [Tarenaya hassleriana] (10) | | /----- RrC6461_p2 [Raphanus raphanistrum] (3) | /---100---+ | | \----- Rsa1.0_00301.1_g00049.1 [Raphanus sativus] (41) | | | /-100-+ /----- GSBRNA2T00143293001 [Brassica napus] (6) | | | /-94-+ | | | | \----- XP_009126020.1 [Brassica rapa] (46) | | \-100+ | /-95-+ | /----- XP_013618476.1 [Brassica oleracea] (18) | | | \-92-+ | | | \----- GSBRNA2T00151773001 [Brassica napus] (39) | /-100+ | /-100-+ | | \--------------------- 676789458 [Sisymbrium irio] (17) | | | | | | /-100+ \-------------------------- Tp6g29080 [Thellungiella parvula] (22) | | | | | | | \------------------------------- Thhalv10013977m [Eutrema salsugineum] (26) | | | | | | /----- Carubv10001291m [Capsella rubella] (7) | | | /-100+ | | | | \----- Cagra.1036s0060.1.p [Capsella grandiflora] (20) | | | /-100+ | | | | | /----- Csa20g021460.1 [Camelina sativa] (9) | | /-100+ | \-100+ | | | | /--53-+ \----- Csa13g017780.1 [Camelina sativa] (19) /-100+ | | | | | | | | | | | \--------------- Bostr.2902s0230.1.p [Boechera stricta] (16) | | | | | /-100+ | | | | | | | /---------- AT5G14960.1 [Arabidopsis thaliana] (29) | | | | | | | | | | \-100+ | | \----100---+ /----- 861888 [Arabidopsis lyrata] (35) | | | \---100---+ \-100+ | | | | \----- Araha.2471s0010.1.p [Arabidopsis halleri] (43) | | | | | | | \-------------------------- KFK25734.1 [Arabis alpina] (40) | | | | | \----------------------------------------- AA40G00587 [Aethionema arabicum] (42) | | | \---------------------------------------------------- KFK37591.1 [Arabis alpina] (38) | /-100+ /----- GSBRNA2T00064149001 [Brassica napus] (8) | | /-100+ | | | \----- XP_009147417.1 [Brassica rapa] (11) | | /-100+ | | | | /----- XP_013587510.1 [Brassica oleracea] (24) | | | \-83-+ | | /-100-+ \----- GSBRNA2T00092264001 [Brassica napus] (37) | | | | | | | | /----- RrC13623_p1 [Raphanus raphanistrum] (21) | | /-99-+ \---100---+ --100+ | | | \----- Rsa1.0_03058.1_g00002.1 [Raphanus sativus] (31) | | | | | | /-97-+ \--------------------- 676731370 [Sisymbrium irio] (33) | | | | | \-----------100-----------+ \-------------------------- Tp3g00740 [Thellungiella parvula] (34) | | | \------------------------------- Thhalv10021032m [Eutrema salsugineum] (23) | | /----- Araha.2866s0016.1.p [Arabidopsis halleri] (15) \---------------------------100--------------------------+ \----- AT3G01330.1 [Arabidopsis thaliana] (30) Root part of tree: /------------------------------------------------------------------- Csa15g001120.1 [Camelina sativa] (1) | |------------------------------------------------------------------- Csa19g003230.1 [Camelina sativa] (27) | | /----------------- (85) + /-------99------+ | | \----------------- Bostr.1460s0076.1.p [Boechera stricta] (47) | /-------100------+ | | | /----------------- Cagra.1390s0037.1.p [Capsella grandiflora] (4) | | \------100------+ \-------100------+ \----------------- Carubv10014041m [Capsella rubella] (25) | \-------------------------------------------------- Csa01g001130.1 [Camelina sativa] (45) |