PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM4411
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Subtree rooted at node 87: /----- XP_009131585.1 [Brassica rapa] (3) /-100+ | \----- GSBRNA2T00130163001 [Brassica napus] (52) /-100+ | | /----- XP_013626927.1 [Brassica oleracea] (12) | \-100+ /--53-+ \----- GSBRNA2T00140620001 [Brassica napus] (27) | | /-100+ \--------------- RrC5355_p1 [Raphanus raphanistrum] (20) | | | \--------------------- RrC15983_p1 [Raphanus raphanistrum] (6) | | /---------- XP_009121402.1 [Brassica rapa] (16) | | /-57-+ /-100+ /----- XP_013610106.1 [Brassica oleracea] (17) | | | \-100+ | | | \----- GSBRNA2T00094866001 [Brassica napus] (30) | | /-100-+ | | | | /----- RrC1487_p4 [Raphanus raphanistrum] (38) /-99-+ | | \---100---+ | | \-100+ \----- Rsa1.0_00047.1_g00004.1 [Raphanus sativus] (39) | | | | | \--------------------- 676789008 [Sisymbrium irio] (25) /-100+ | | | \------------------------------- Tp6g26970 [Thellungiella parvula] (26) | | | \------------------------------------ Thhalv10013344m [Eutrema salsugineum] (46) | | /----- Carubv10003869m [Capsella rubella] (7) | /---100---+ | | \----- Cagra.4849s0008.1.p [Capsella grandiflora] (35) /-100+ | | | /--62-+ /----- Csa13g020020.1 [Camelina sativa] (40) | | | | /-99-+ | | | | | \----- Csa08g009420.1 [Camelina sativa] (44) | | /-100+ \-100+ | | | | \---------- Csa20g025340.1 [Camelina sativa] (48) | | | | /-100-+ \------99------+ \--------------------- Bostr.2618s0061.1.p [Boechera stricta] (11) | | | | | | /----- AT5G17260.1 [Arabidopsis thaliana] (43) | | \---------100--------+ | | \----- 488590 [Arabidopsis lyrata] (50) /-100+ | | | \---------------------------------------------- AA40G00382 [Aethionema arabicum] (18) | | | | /----- XP_010549796.1 [Tarenaya hassleriana] (32) /-100+ \----------------------100---------------------+ | | \----- XP_010525037.1 [Tarenaya hassleriana] (51) | | --59-+ \--------------------------------------------------------- AA10G00295 [Aethionema arabicum] (41) | | /----- Thhalv10023058m [Eutrema salsugineum] (15) \---------------------------100--------------------------+ \----- Thhalv10022055m [Eutrema salsugineum] (19) Root part of tree: /------------------------------------------------------------------- XP_009119137.1 [Brassica rapa] (1) | |------------------------------------------------------------------- GSBRNA2T00015428001 [Brassica napus] (13) | | /------ Cagra.2098s0066.1.p [Capsella grandiflora] (2) | /----100----+ | | \------ Carubv10013584m [Capsella rubella] (8) | | | /--89-+ /------ Csa19g005320.1 [Camelina sativa] (9) | | | /-100-+ | | | | \------ Csa01g002880.1 [Camelina sativa] (24) | | \--97-+ | | \------------ Csa15g002950.1 [Camelina sativa] (21) | /--64-+ | | | /------ 871619 [Arabidopsis lyrata] (5) | | | /-100-+ | | | | \------ Araha.7513s0013.1.p [Arabidopsis halleri] (10) | /--100-+ \-----94----+ | | | \------------ AT3G03200.1 [Arabidopsis thaliana] (14) | | | | /--90-+ \------------------------------ Bostr.19046s0031.1.p [Boechera stricta] (49) + | | | /-100-+ \------------------------------------- KFK37763.1 [Arabis alpina] (36) | | | | | \------------------------------------------- (87) | | | | /------ XP_013584829.1 [Brassica oleracea] (4) | | /-100-+ | | | \------ GSBRNA2T00041385001 [Brassica napus] (42) | | /--91-+ | /-100-+ | | /------ GSBRNA2T00076116001 [Brassica napus] (22) | | | | \-100-+ | | | /-100-+ \------ XP_009130343.1 [Brassica rapa] (47) | | | | | | | | | | /------ RrC5633_p1 [Raphanus raphanistrum] (29) | | | /-100-+ \----100----+ | | | | | \------ Rsa1.0_00389.1_g00001.1 [Raphanus sativus] (45) | /-100-+ | | | | | | \--------66--------+ \------------------------ 676731142 [Sisymbrium irio] (34) | | | | | | | \------------------------------ Tp3g02240 [Thellungiella parvula] (28) | | | \--99-+ | /------ RrC2577_p3 [Raphanus raphanistrum] (23) | \-----------------------100----------------------+ | \------ Rsa1.0_00008.1_g00055.1 [Raphanus sativus] (37) | | /------ XP_013621799.1 [Brassica oleracea] (31) \--------------------------100-------------------------+ \------ GSBRNA2T00094099001 [Brassica napus] (33) |