PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Phylogenetic Tree for OGEM3061
Phylogenetic tree for protein ? help Back to Top |
---|
Subtree rooted at node 110: /---------- AT1G77920.1 [Arabidopsis thaliana] (2) | /------100------+ /----- 877903 [Arabidopsis lyrata] (32) | \-100+ | \----- Araha.10817s0004.1.p [Arabidopsis halleri] (63) | | /---------- Csa16g042150.1 [Camelina sativa] (22) | | /------100-----+ /-100+ /----- Csa07g050580.1 [Camelina sativa] (29) | | | \-99-+ | | /--98-+ \----- Csa09g084700.1 [Camelina sativa] (30) | | | | | | | \--------------- Bostr.20129s0227.1.p [Boechera stricta] (27) | \-100+ | | /----- Carubv10020476m [Capsella rubella] (25) | \------100------+ | \----- Cagra.0096s0044.1.p [Capsella grandiflora] (60) | | /----- XP_009106436.1 [Brassica rapa] (4) | /-100+ | | \----- GSBRNA2T00146482001 [Brassica napus] (51) | /-100+ | | | /----- GSBRNA2T00147931001 [Brassica napus] (18) | | \-100+ /-100+ /-100-+ \----- XP_013589879.1 [Brassica oleracea] (37) | | | | | | | | /----- Rsa1.0_07756.1_g00002.1 [Raphanus sativus] (14) | | /-97-+ \----88---+ | | | | \----- RrC625_p2 [Raphanus raphanistrum] (49) | | | | | | | \--------------------- 676715014 [Sisymbrium irio] (19) | | /-99-+ | | | | /----- XP_013588544.1 [Brassica oleracea] (12) | | | | /-64-+ /-100-+ | | | | \----- GSBRNA2T00131848001 [Brassica napus] (65) | | | | \------100------+ | | | /-100+ | /----- XP_009104596.1 [Brassica rapa] (13) | | | | | \-100+ | | | | | \----- GSBRNA2T00099260001 [Brassica napus] (56) | | \-94-+ | | | | \------------------------------- Tp5g33070 [Thellungiella parvula] (66) | | | | | \------------------------------------ Thhalv10018715m [Eutrema salsugineum] (31) | | | \---------------------------------------------- AA31G00181 [Aethionema arabicum] (15) | | /----- Carubv10009423m [Capsella rubella] (5) | /-100+ | | \----- Cagra.1707s0011.1.p [Capsella grandiflora] (38) | /-100+ | | | /----- Csa03g025960.1 [Camelina sativa] (21) | | \-100+ | | \----- Csa17g028970.1 [Camelina sativa] (50) /-84-+ /--62-+ | | | | /---------- AT1G22070.1 [Arabidopsis thaliana] (20) | | | | | | | | \-100+ /----- 472441 [Arabidopsis lyrata] (47) | | /------100-----+ \-100+ | | | | \----- Araha.7166s0001.1.p [Arabidopsis halleri] (48) | | | | | | | \--------------------- Bostr.12659s0060.1.p [Boechera stricta] (9) | | | | | | /----- GSBRNA2T00015686001 [Brassica napus] (8) | | | /-100+ | | | | \----- XP_009145375.1 [Brassica rapa] (17) | | | /-100+ | | | | \---------- XP_013637780.1 [Brassica oleracea] (64) | | | /-100-+ | | | | \--------------- GSBRNA2T00065604001 [Brassica napus] (16) | | | /-100+ | | | | | /----- RrC11353_p1 [Raphanus raphanistrum] (35) | \------100------+ | \------100------+ | | | \----- Rsa1.0_01344.1_g00009.1 [Raphanus sativus] (54) /-100+ | | | | | | /----- RrC6274_p1 [Raphanus raphanistrum] (10) | | | | /---100---+ | | | | | \----- Rsa1.0_01982.1_g00006.1 [Raphanus sativus] (53) | | | | | | | | |----100---+ /----- XP_009110151.1 [Brassica rapa] (23) | | | /-100+ | /-100+ | | | | | | | \----- GSBRNA2T00073107001 [Brassica napus] (61) | | | | | \-100+ | | | | | | /----- GSBRNA2T00066681001 [Brassica napus] (43) | | | | | \-100+ --100+ | | | | \----- XP_013605403.1 [Brassica oleracea] (44) | | \-69-+ | | | | |-------------------------- Tp1g19580 [Thellungiella parvula] (28) | | | | | | | \-------------------------- 676753868 [Sisymbrium irio] (58) | | | | | \------------------------------- Thhalv10007944m [Eutrema salsugineum] (33) | | | \--------------------------------------------------------- XP_010521212.1 [Tarenaya hassleriana] (39) | \-------------------------------------------------------------- evm.model.supercontig_49.112 [Carica papaya] (34) Root part of tree: /------------------------------------------------------------------- Gorai.002G219800.1 [Gossypium raimondii] (1) | |------------------------------------------------------------------- Gh_D01G1881 [Gossypium hirsutum] (7) | | /-------------------------------------- (110) | | | | /------------------- Neem_8072_f_3 [Azadirachta indica] (6) | | | | /---100---+ /---100---+ /---------- Ciclev10004036m [Citrus clementina] (46) | | | | \---100--+ | | | | \---------- orange1.1g036441m [Citrus sinensis] (57) | | \---99---+ | | | /---------- EcC077050.10 [Eucalyptus camaldulensis] (52) | | \--------100-------+ + | \---------- Eucgr.F03732.1.p [Eucalyptus grandis] (55) | | | | /---------- Gh_D06G0357 [Gossypium hirsutum] (3) | | /---100--+ | /---100--+ | \---------- Gorai.010G045700.1 [Gossypium raimondii] (24) | | | /---100---+ | | | | | /---------- Cotton_A_18442_BGI-A2_v1.0 [Gossypium arboreum] (36) | | | | \---100--+ | | | | \---------- Gh_A06G0329 [Gossypium hirsutum] (62) | | | /---86---+ | | | | | /------------------- Gh_A02G0775 [Gossypium hirsutum] (26) | | | | | | | | | | | | /---------- Gh_D02G0824 [Gossypium hirsutum] (40) \---100---+ | | \---100---+---98---+ | \----97---+ | \---------- Gorai.005G092400.1 [Gossypium raimondii] (42) | | | | | \------------------- Cotton_A_25482_BGI-A2_v1.0 [Gossypium arboreum] (41) | | | \-------------------------------------- Thecc1EG034993t1 [Theobroma cacao] (45) | | /---------- Gh_A01G1578 [Gossypium hirsutum] (11) \----------------------80----------------------+ \---------- Cotton_A_23932_BGI-A2_v1.0 [Gossypium arboreum] (59) |