PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Gh_D06G0357 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Family | bZIP | ||||||||
Protein Properties | Length: 357aa MW: 40513.6 Da PI: 8.6002 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 35.3 | 2.6e-11 | 73 | 113 | 3 | 40 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHH...HHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLee...kvkeLea 40 +k +rr+++NReAAr+sR+RKka++++Le k ++Le+ Gh_D06G0357 73 TDKIQRRLAQNREAARKSRLRKKAYVQQLESsrlKLAQLEQ 113 7899**************************83333444444 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 2.0E-8 | 66 | 119 | No hit | No description |
SMART | SM00338 | 1.5E-7 | 71 | 134 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.163 | 73 | 117 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 9.8E-8 | 73 | 111 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 5.63E-7 | 75 | 116 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 78 | 93 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF14144 | 2.4E-28 | 161 | 236 | IPR025422 | Transcription factor TGA like domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 357 aa Download sequence Send to blast |
MSSLSAELTR RMAMYEQFHQ INKWGDTFNG EDSPKTGSST VLQVDVRLEN KAEYISSEKT 60 EPSRSDQGTN KPTDKIQRRL AQNREAARKS RLRKKAYVQQ LESSRLKLAQ LEQELERARQ 120 QGLYISSAST GYFGLSAAAN AGITAFEMEY GNWVEEQNKK ICELRSALQA HITDIELRIL 180 VENSLNHYCN LFHIKADAAK ADIFYLISGI WRTTAERFFH WIGGFRPSEL LNVVMSQIEP 240 LTDQQQLEVY NLQQSSQQAE DALSQGIDRL QQNLAESVAT DLSSGNYRAQ LAAAIDKLQA 300 LEGFVKQADH LRQQTLQQMA RILTTRQAAR GLLALGEYFH RLRALSSLWS ARPREPA |
Expression -- UniGene ? help Back to Top | ||||||
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UniGene ID | E-value | Expressed in | ||||
Ghi.4423 | 0.0 | boll |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. May be involved in the induction of the systemic acquired resistance (SAR) via its interaction with NPR1 (By similarity). {ECO:0000250, ECO:0000269|PubMed:12953119}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_016701329.1 | 0.0 | PREDICTED: transcription factor TGA7-like | ||||
Refseq | XP_016701330.1 | 0.0 | PREDICTED: transcription factor TGA7-like | ||||
Refseq | XP_016701331.1 | 0.0 | PREDICTED: transcription factor TGA7-like | ||||
Swissprot | Q93ZE2 | 1e-163 | TGA7_ARATH; Transcription factor TGA7 | ||||
TrEMBL | A0A1U8KFT4 | 0.0 | A0A1U8KFT4_GOSHI; transcription factor TGA7-like | ||||
TrEMBL | A0A2P5QJE7 | 0.0 | A0A2P5QJE7_GOSBA; Uncharacterized protein | ||||
STRING | Gorai.010G045700.1 | 0.0 | (Gossypium raimondii) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM3061 | 27 | 66 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G77920.1 | 1e-152 | bZIP family protein |
Publications ? help Back to Top | |||
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