PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GSBRNA2T00147931001 | ||||||||
Common Name | GSBRNA2T00147931001 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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Family | bZIP | ||||||||
Protein Properties | Length: 431aa MW: 49302.7 Da PI: 7.0147 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 32.5 | 1.9e-10 | 151 | 194 | 4 | 47 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkk 47 +k rr+++NReAAr+sR+R+ka++++Lee +L++ ++L k GSBRNA2T00147931001 151 DKMKRRLAQNREAARKSRLRRKAYVQQLEESRLKLSQLEQELEK 194 7899**************************98888888776654 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 2.2E-4 | 144 | 206 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 3.0E-8 | 145 | 195 | No hit | No description |
PROSITE profile | PS50217 | 9.37 | 150 | 194 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 5.7E-7 | 151 | 194 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 2.25E-6 | 152 | 195 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 155 | 170 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF14144 | 1.7E-30 | 234 | 308 | IPR025422 | Transcription factor TGA like domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 431 aa Download sequence Send to blast |
MLHPVSSSLR KKVEALQEFL VADIIWCVLN RYKRTTRSPF GSVKEALISK QNKEEMMSSF 60 SPTQLASLRD MGIYEPFQQL VSWGNVYKSD INDHSPNTAS SSVIQVDARI DDHNNIVKSN 120 YASTSHNHIE AEPSSNDHQD VDDDDDDRIH DKMKRRLAQN REAARKSRLR RKAYVQQLEE 180 SRLKLSQLEQ ELEKAKQQGL RVSNSIPSGS ITNARIATFE MEHSHWLEEQ SRRVSELRIA 240 LQAHISDIEL RMLVESCLNH YANLFRMKSD AAKADVFYLI SGMWRTSTER FFQWIGGFRP 300 SELLNVVMPY LQPLTDQQVL EVRNLQQSSQ QAEEALSQGI EKLQQSLVEN IVVDAFSMDY 360 PPQMAAALEN LQALEGFVNQ ADHLRQQTLQ QMAKILTTRQ SARGLLALGE YLHRLRALSS 420 LWAARPREPT * |
Expression -- UniGene ? help Back to Top | ||||||
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UniGene ID | E-value | Expressed in | ||||
Bna.21828 | 0.0 | leaf| seed |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. May be involved in the induction of the systemic acquired resistance (SAR) via its interaction with NPR1 (By similarity). {ECO:0000250, ECO:0000269|PubMed:12953119}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | GSBRNA2T00147931001 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AK353384 | 0.0 | AK353384.1 Thellungiella halophila mRNA, complete cds, clone: RTFL01-35-N08. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_013589879.1 | 0.0 | PREDICTED: transcription factor TGA7 | ||||
Refseq | XP_013650012.1 | 0.0 | transcription factor TGA7-like | ||||
Refseq | XP_013650014.1 | 0.0 | transcription factor TGA7-like | ||||
Refseq | XP_022560826.1 | 0.0 | transcription factor TGA7-like | ||||
Swissprot | Q93ZE2 | 0.0 | TGA7_ARATH; Transcription factor TGA7 | ||||
TrEMBL | A0A3P6H3T0 | 0.0 | A0A3P6H3T0_BRAOL; Uncharacterized protein | ||||
STRING | Bo6g121590.1 | 0.0 | (Brassica oleracea) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM3061 | 27 | 66 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G77920.1 | 0.0 | bZIP family protein |
Publications ? help Back to Top | |||
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