PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cotton_A_25482_BGI-A2_v1.0 | ||||||||
Common Name | F383_19393 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Family | bZIP | ||||||||
Protein Properties | Length: 344aa MW: 39205.9 Da PI: 6.5861 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 34.1 | 6e-11 | 63 | 99 | 4 | 40 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLea 40 +k +rr+++NReAAr+sR+RKka++++Le +L + Cotton_A_25482_BGI-A2_v1.0 63 DKTQRRLEQNREAARKSRLRKKAYVQQLESSRLKLAQ 99 799**************************84433333 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 1.7E-8 | 55 | 109 | No hit | No description |
SMART | SM00338 | 2.2E-6 | 60 | 120 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.22 | 62 | 106 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 4.1E-8 | 63 | 102 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.41E-7 | 64 | 106 | No hit | No description |
CDD | cd14708 | 1.98E-21 | 64 | 116 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 67 | 82 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF14144 | 2.7E-28 | 151 | 226 | IPR025422 | Transcription factor TGA like domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 344 aa Download sequence Send to blast |
MTIYEQLNQI SRWGDSFNRG DSPNTGSSTI VEGDVRLENK AGYISCDQVE PSRSDQETNK 60 PIDKTQRRLE QNREAARKSR LRKKAYVQQL ESSRLKLAQL EQELERTRQQ GIYISSPSDT 120 GYFGLSGTVN SGITAFEMEY GHWVEVQNKQ TCELRSALQA HITDIELQIL VEHGLNHYCN 180 LFRMKADAAK ADVFYLNSGI WRTSAERFFH WIGGFRPSEL LNVVMSHIEP LTDQQQLEVC 240 NLRQSSQQAE DALSQGIDKL QQNFSCSVAS DLSWGHYRAQ MAVATDIIEA LEGFVNQADH 300 LREQTLLQMV RILTTHQAAR GLLALGDYFH RLRALSSLWA THPR |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. May be involved in the induction of the systemic acquired resistance (SAR) via its interaction with NPR1 (By similarity). {ECO:0000250, ECO:0000269|PubMed:12953119}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_017614473.1 | 0.0 | PREDICTED: transcription factor TGA3-like isoform X1 | ||||
Refseq | XP_017614474.1 | 0.0 | PREDICTED: transcription factor TGA3-like isoform X1 | ||||
Refseq | XP_017614475.1 | 0.0 | PREDICTED: transcription factor TGA3-like isoform X1 | ||||
Refseq | XP_017614476.1 | 0.0 | PREDICTED: transcription factor TGA3-like isoform X1 | ||||
Refseq | XP_017614477.1 | 0.0 | PREDICTED: transcription factor TGA3-like isoform X1 | ||||
Swissprot | Q93ZE2 | 1e-148 | TGA7_ARATH; Transcription factor TGA7 | ||||
TrEMBL | A0A0B0NHC6 | 0.0 | A0A0B0NHC6_GOSAR; Transcription factor TGA7 | ||||
STRING | Gorai.005G092400.1 | 0.0 | (Gossypium raimondii) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM3061 | 27 | 66 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G77920.1 | 1e-142 | bZIP family protein |
Publications ? help Back to Top | |||
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