PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Phylogenetic Tree for OGEM1753
Phylogenetic tree for protein ? help Back to Top |
---|
Subtree rooted at node 127: /----- Cotton_A_23165_BGI-A2_v1.0 [Gossypium arboreum] (4) /-71-+ | \----- Gh_A13G1269 [Gossypium hirsutum] (14) /-100+ | | /----- Gorai.013G172500.1 [Gossypium raimondii] (47) | \-91-+ | \----- Gh_D13G1573 [Gossypium hirsutum] (48) /--93-+ | | /----- Gh_D11G2955 [Gossypium hirsutum] (56) | | /-99-+ | | | \----- Gorai.007G325700.1 [Gossypium raimondii] (72) | \-100+ /-93-+ \---------- Gh_A11G2590 [Gossypium hirsutum] (69) | | | | /---------- Gorai.002G064900.1 [Gossypium raimondii] (43) | | | | | | /----- Gh_A01G0419 [Gossypium hirsutum] (49) /-100+ \----100---+-75-+ | | | \----- Gh_D01G0423 [Gossypium hirsutum] (76) | | | | | \---------- Cotton_A_20105_BGI-A2_v1.0 [Gossypium arboreum] (71) | | /-65-+ \-------------------------- Thecc1EG031686t1 [Theobroma cacao] (22) | | | | /----- orange1.1g037696m [Citrus sinensis] (26) | | /-100+ | | | \----- Ciclev10008720m [Citrus clementina] (42) /-62-+ \---------100--------+ | | | /----- Neem_31072_f_1 [Azadirachta indica] (50) | | \-100+ | | \----- Neem_4121_f_1 [Azadirachta indica] (68) /-100+ | | | \------------------------------------ evm.model.supercontig_131.79 [Carica papaya] (29) | | /-100-+ \----------------------------------------- Eucgr.F03286.1.p [Eucalyptus grandis] (51) | | | \---------------------------------------------- Eucgr.K01085.1.p [Eucalyptus grandis] (9) | | /----- Neem_23027_f_1 [Azadirachta indica] (20) /-99-+ /-100+ | | | \----- Neem_2566_f_3 [Azadirachta indica] (66) | | /-99-+ | | | \---------- Ciclev10015966m [Citrus clementina] (46) /-100+ \-----------------99-----------------+ | | \--------------- Thecc1EG003607t1 [Theobroma cacao] (59) | | --90-+ \--------------------------------------------------------- evm.model.supercontig_209.8 [Carica papaya] (63) | | /----- XP_010524047.1 [Tarenaya hassleriana] (6) \---------------------------100--------------------------+ \----- XP_010552219.1 [Tarenaya hassleriana] (65) Subtree rooted at node 129: /---------------------------------------------------- AA61G00245 [Aethionema arabicum] (3) | | /--------------------- KFK35037.1 [Arabis alpina] (7) | | | | /---------- AT3G58120.1 [Arabidopsis thaliana] (12) | | | | | /-98-+ /----- Araha.3845s0008.1.p [Arabidopsis halleri] (19) | /-----------70-----------+ | \-64-+ | | | | \----- 486262 [Arabidopsis lyrata] (61) | | | | | | | | /----- Cagra.0686s0029.1.p [Capsella grandiflora] (17) | | \-100-+ /-100+ /-100+ | | | \----- Carubv10017617m [Capsella rubella] (37) | | | | | | | | | |---------- Bostr.20903s0063.1.p [Boechera stricta] (24) | | | \-100+ | | | | /----- Csa09g070700.1 [Camelina sativa] (45) | | | | | | | | \-95-+----- Csa04g044650.1 [Camelina sativa] (57) | | | | | | | \----- Csa06g033960.1 [Camelina sativa] (77) | | | | | | /----- XP_013588300.1 [Brassica oleracea] (11) | | | /-99-+ | \--99-+ | \----- GSBRNA2T00105790001 [Brassica napus] (44) | | /-----------100-----------+ | | | \---------- XP_009104108.1 [Brassica rapa] (30) | | | | | | /----- Rsa1.0_05805.1_g00001.1 [Raphanus sativus] (13) | | | /------100------+ /-100+ | | | \----- RrC30030_p1 [Raphanus raphanistrum] (60) | | | | | | | | | | /----- GSBRNA2T00121911001 [Brassica napus] (21) | | | /-98-+ | /-71-+ | | | | | /-100+ | \----- XP_009116504.1 [Brassica rapa] (34) | | | | | | | /-82-+ | | | | | | | | | /----- GSBRNA2T00155741001 [Brassica napus] (36) | | | | | | | | \-100+ | | | | | /-66-+ \-100-+ \----- XP_013605646.1 [Brassica oleracea] (54) | | | | | | | | --100+ | \-97-+ | | | \--------------- RrC79_p10 [Raphanus raphanistrum] (31) | | | \-98-+ | | | | | \-------------------------- Tp5g04600 [Thellungiella parvula] (55) | | | | | | | \------------------------------- 676754756 [Sisymbrium irio] (41) | | | | | \----------------------------------------- Thhalv10006090m [Eutrema salsugineum] (58) | | | \--------------------------------------------------------- (127) | \-------------------------------------------------------------- AA21G00036 [Aethionema arabicum] (10) Root part of tree: /------------------------------------------------------------------- GSBRNA2T00058357001 [Brassica napus] (1) | |------------------------------------------------------------------- XP_009133535.1 [Brassica rapa] (73) | | /------ RrC156_p6 [Raphanus raphanistrum] (2) | /----------100----------+ | | \------ Rsa1.0_00469.1_g00001.1 [Raphanus sativus] (18) | | | | /------ GSBRNA2T00042313001 [Brassica napus] (16) | | /-100-+ | /--------100-------+ | \------ XP_013631311.1 [Brassica oleracea] (38) | | | /-100-+ | | | | \------------ GSBRNA2T00140933001 [Brassica napus] (33) | | | /--65-+ | | | | \------------------ XP_009142832.1 [Brassica rapa] (28) | | \-100-+ | | \------------------------ GSBRNA2T00132723001 [Brassica napus] (74) | | | | /------ (129) | | /-----------89----------+ | | | \------ KFK37054.1 [Arabis alpina] (15) | | | + | | /------ Csa05g009210.1 [Camelina sativa] (23) | | | /--66-+ | | | | \------ Csa04g057930.1 [Camelina sativa] (40) | /-100-+ | /-100-+ | | | /--99--+ | \------------ Csa06g048430.1 [Camelina sativa] (35) | | | | | /-100-+ | | | | | | | /------ Carubv10023644m [Capsella rubella] (67) | | | | | | \----100----+ | | | | | | \------ Cagra.2636s0024.1.p [Capsella grandiflora] (75) | | | | | | | | | | \-100-+ /------ Araha.0018s0016.1.p [Arabidopsis halleri] (32) | | | | | /-100-+ | | | /--64-+ | | \------ 483330 [Arabidopsis lyrata] (53) | | | | | | /--97-+ | /-100-+ | | | | | \------------ AT2G42380.2 [Arabidopsis thaliana] (39) | | | | | | \--95-+ | | | | | | \------------------ Bostr.18722s0001.1.p [Boechera stricta] (64) | | | \--72-+ | | | | | | /------ Tp4g24530 [Thellungiella parvula] (25) | | | | \--------------67--------------+ | | | | \------ 676742290 [Sisymbrium irio] (62) | | | | \-100-+ | \------------------------------------------- Thhalv10016923m [Eutrema salsugineum] (5) | | | | /------ Rsa1.0_03407.1_g00003.1 [Raphanus sativus] (52) | \-----------------------100----------------------+ | \------ RrC2685_p1 [Raphanus raphanistrum] (70) | | /------ XP_013622837.1 [Brassica oleracea] (8) \--------------------------100-------------------------+ \------ GSBRNA2T00019164001 [Brassica napus] (27) |