PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Neem_31072_f_1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Meliaceae; Azadirachta
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Family | bZIP | ||||||||
Protein Properties | Length: 152aa MW: 17120.5 Da PI: 10.7456 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 36.9 | 7.8e-12 | 15 | 62 | 5 | 52 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleel 52 kr +r NR +A+rsR RK+++i eLe+ v +L++e +aL ++ l Neem_31072_f_1 15 KRVKRILANRQSAQRSRVRKLQYISELERSVTTLQTEVSALSPRVAFL 62 8999*********************************99998777655 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 4.4E-14 | 11 | 75 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.714 | 13 | 76 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 2.81E-12 | 15 | 69 | No hit | No description |
Pfam | PF00170 | 1.9E-10 | 15 | 59 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 1.2E-14 | 15 | 67 | No hit | No description |
CDD | cd14703 | 5.21E-20 | 16 | 66 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 18 | 33 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 152 aa Download sequence Send to blast |
QPPPASNSDT VIDPKRVKRI LANRQSAQRS RVRKLQYISE LERSVTTLQT EVSALSPRVA 60 FLDHQRLVLN VDNSALKQRI AALAQDKIFK DAHQDALKKE IERLRQVYRQ QNLKKMNNNN 120 NAAPPLASAA PTQQPMNTDA IGCTDKDQQL LS |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator. {ECO:0000269|PubMed:17719007}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_002285311.2 | 9e-75 | PREDICTED: basic leucine zipper 34 | ||||
Swissprot | Q9M2K4 | 9e-64 | BZP61_ARATH; Basic leucine zipper 61 | ||||
TrEMBL | A5AUL2 | 4e-74 | A5AUL2_VITVI; Uncharacterized protein | ||||
TrEMBL | E0CSC7 | 7e-74 | E0CSC7_VITVI; Uncharacterized protein | ||||
STRING | VIT_19s0014g01780.t01 | 1e-74 | (Vitis vinifera) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM1753 | 27 | 77 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G58120.1 | 2e-64 | bZIP family protein |
Publications ? help Back to Top | |||
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