PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Thecc1EG003607t1 | ||||||||
Common Name | TCM_003607 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Theobroma
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Family | bZIP | ||||||||
Protein Properties | Length: 299aa MW: 33493.4 Da PI: 6.8855 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 33.4 | 9.6e-11 | 168 | 211 | 5 | 48 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48 kr +r NR +A+rsR RK+++i eLe+ v +L+ae + L + Thecc1EG003607t1 168 KRVKRILANRQSAQRSRVRKLQYISELERSVTSLQAEVSVLSPR 211 8999********************************98877655 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 2.6E-13 | 164 | 228 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.622 | 166 | 218 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 8.7E-9 | 168 | 212 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 2.2E-11 | 168 | 219 | No hit | No description |
SuperFamily | SSF57959 | 3.7E-11 | 168 | 222 | No hit | No description |
CDD | cd14703 | 2.21E-21 | 169 | 219 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 171 | 186 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 299 aa Download sequence Send to blast |
MAQLPPKIPN WPDMVHQRMP ASATTSSTQQ QNNPCWVDEF LDFSSVRRGT HRRSVSDSIA 60 FLEAPMLEEC RGSNSNAPPG TGGSSNQDFD KFDDEQFMSM FTDDVPNAVA PTVSSSNPSS 120 PSDHNSINDD QKQQMEMIRK ESEEVQSQCK MESQANTNAS TDRIIDPKRV KRILANRQSA 180 QRSRVRKLQY ISELERSVTS LQAEVSVLSP RVAFLDHQRL LLNVDNSALK QRIAALAQDK 240 IFKDAHQEAL KREIERLRQV YHQQNLKKME NAAHSPTPTP PPAADVQASA EKEKLVNV* |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator. {ECO:0000269|PubMed:17719007}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_007050026.2 | 0.0 | PREDICTED: basic leucine zipper 61 | ||||
Swissprot | Q9M2K4 | 1e-124 | BZP61_ARATH; Basic leucine zipper 61 | ||||
TrEMBL | A0A061DW36 | 0.0 | A0A061DW36_THECC; Basic-leucine zipper (BZIP) transcription factor family protein, putative | ||||
STRING | EOX94183 | 0.0 | (Theobroma cacao) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM1753 | 27 | 77 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G58120.1 | 1e-114 | bZIP family protein |
Link Out ? help Back to Top | |
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Phytozome | Thecc1EG003607t1 |
Entrez Gene | 18612967 |
Publications ? help Back to Top | |||
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