PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Thecc1EG031686t1
Common NameTCM_031686
Organism
Theobroma cacao
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Theobroma
Family bZIP
Protein Properties Length: 336aa    MW: 37601.6 Da    PI: 6.6062
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Thecc1EG031686t1genomeCGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1353.1e-11188233550
                       CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
            bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 
                       kr +r   NR +A+rsR RK+++i eLe+ v +L++e +aL  ++ 
  Thecc1EG031686t1 188 KRVKRILANRQSAQRSRVRKLQYISELERSVTTLQTEVSALSPRVA 233
                       8999*********************************999987765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.1E-13184248IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.703186238IPR004827Basic-leucine zipper domain
SuperFamilySSF579598.84E-12188242No hitNo description
Gene3DG3DSA:1.20.5.1705.1E-14188239No hitNo description
PfamPF001708.3E-10188233IPR004827Basic-leucine zipper domain
CDDcd147031.04E-23189239No hitNo description
PROSITE patternPS000360191206IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 336 aa     Download sequence    Send to blast
MAQLPPKIPN MTQNWPSFPH QRMPSTMANF IPTTSTAIPS STTTTNGSNH HPSWVDEFLD  60
FSSARRGAHR RSISDSIAFL EQPLAEECRD SNARMTTETN VFDRLDDEQL MSMFSDDVAV  120
NVAAQTVSSS NPSTPSDQNS NNDEKPVPSL DLQQPKNEPG DVESSCKAET QATQPPPTSN  180
DDSIIDPKRV KRILANRQSA QRSRVRKLQY ISELERSVTT LQTEVSALSP RVAFLDHQRL  240
ILNVDNSALK QRIAALAQDK IFKDAHHEAL KKEIERLRQV YQQQQNLKKM NTTTTTSTNT  300
NNHHAPPQQQ QQQQQTSSVN TDNMVCSDVK EQLIT*
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator. {ECO:0000269|PubMed:17719007}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007021637.20.0PREDICTED: basic leucine zipper 34
SwissprotQ9M2K41e-101BZP61_ARATH; Basic leucine zipper 61
TrEMBLA0A061F9230.0A0A061F923_THECC; Basic-leucine zipper transcription factor family protein
STRINGEOY131620.0(Theobroma cacao)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM17532777
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58120.11e-101bZIP family protein
Publications ? help Back to Top
  1. Motamayor JC, et al.
    The genome sequence of the most widely cultivated cacao type and its use to identify candidate genes regulating pod color.
    Genome Biol., 2013. 14(6): p. r53
    [PMID:23731509]
  2. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  3. Gibalová A, et al.
    Characterization of pollen-expressed bZIP protein interactions and the role of ATbZIP18 in the male gametophyte.
    Plant Reprod, 2017. 30(1): p. 1-17
    [PMID:27896439]
  4. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]