PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cotton_A_20105_BGI-A2_v1.0 | ||||||||
Common Name | F383_06996 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Family | bZIP | ||||||||
Protein Properties | Length: 310aa MW: 34908.7 Da PI: 6.8018 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 35.1 | 2.9e-11 | 180 | 225 | 5 | 50 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 kr +r NR +A+rsR RK+++i eLe+ v +L++e +aL ++ Cotton_A_20105_BGI-A2_v1.0 180 KRVKRILANRQSAQRSRVRKLQYISELERSVTTLQTEVSALSPRVA 225 8999*********************************999987765 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 7.1E-14 | 176 | 240 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.703 | 178 | 230 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 8.7E-10 | 180 | 225 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.13E-11 | 180 | 234 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 4.6E-14 | 180 | 231 | No hit | No description |
CDD | cd14703 | 3.25E-22 | 181 | 231 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 183 | 198 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 310 aa Download sequence Send to blast |
MTQNWPSFPH QRLPTMANFI STTANTATMN ASHNHQPSWV DEFLDFSSAR RGAHRRSISD 60 SIAFLEQPLV EECRDSNTNH NNNAMITETN VFDRLDDEQL MSMFSDDVAV TMAAAPTLSS 120 SNPSTPTSDQ NSNNDEKPVP SLDLQQPKNE PGEVESSCKP EPQAAQPPST SNGDPIVDPK 180 RVKRILANRQ SAQRSRVRKL QYISELERSV TTLQTEVSAL SPRVAFLDHQ RLILNVDNSA 240 LKQRIAALAQ DKIFKDAHQE ALKKEIERLR QVYQQQQSLK KMNSNNSNNH HAPPQQQPSQ 300 PQPTKKEEQL |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator. {ECO:0000269|PubMed:17719007}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_016703270.1 | 0.0 | PREDICTED: basic leucine zipper 61-like | ||||
Refseq | XP_017639050.1 | 0.0 | PREDICTED: basic leucine zipper 61-like | ||||
Swissprot | Q9M2K4 | 1e-103 | BZP61_ARATH; Basic leucine zipper 61 | ||||
TrEMBL | A0A0B0NGA7 | 0.0 | A0A0B0NGA7_GOSAR; Transcription factor VIP1-like protein | ||||
TrEMBL | A0A1U8KLG5 | 0.0 | A0A1U8KLG5_GOSHI; basic leucine zipper 61-like | ||||
STRING | Gorai.002G064900.1 | 0.0 | (Gossypium raimondii) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM1753 | 27 | 77 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G58120.1 | 7e-90 | bZIP family protein |
Publications ? help Back to Top | |||
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