PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_013605646.1
Organism
Brassica oleracea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
Family bZIP
Protein Properties Length: 331aa    MW: 36927.3 Da    PI: 6.8984
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_013605646.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_133.21.1e-10207250548
                     CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48 
                     kr +r   NR +A+rsR RK+++i eLe+ v +L++e + L  +
  XP_013605646.1 207 KRVKRILANRQSAQRSRVRKLQYISELERSVTSLQTEVSVLSPR 250
                     899********************************998777655 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.7E-13203267IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.588205257IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.49E-11207261No hitNo description
PfamPF001702.8E-9207251IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1703.0E-13207258No hitNo description
CDDcd147031.46E-22208258No hitNo description
PROSITE patternPS000360210225IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 331 aa     Download sequence    Send to blast
MAQLPPKIPT MTTTTTPHWP DFSSQKLPSI AATAAATVAT AGQQNPTWMD EFLDFSSTRR  60
GTHRRSISDS IAFLEAPSSG VGNHHFDRFD DEQFMSMFND DVHQNHHNNN HNNHHGSVNG  120
NVGHTRSSSN TSTPSDPNSL SEEDNKEQPP SDNNLMDTTD NNNVAGNNYN ESDEVQSQCK  180
TEPQDGAPSS ANQNSGGSSG NRINDPKRVK RILANRQSAQ RSRVRKLQYI SELERSVTSL  240
QTEVSVLSPR VAFLDHQRLL LNVDNSAIKQ RIAALAQDKI FKDAHQEALR REIERLRQVY  300
HQQSLKKMEN NVSDQSPADI KPSVEKKQLN A
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator. {ECO:0000269|PubMed:17719007}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_013605646.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_013605646.10.0PREDICTED: basic leucine zipper 61-like
RefseqXP_013702575.10.0basic leucine zipper 61-like
SwissprotQ9M2K41e-180BZP61_ARATH; Basic leucine zipper 61
TrEMBLA0A0D3DU400.0A0A0D3DU40_BRAOL; Uncharacterized protein
TrEMBLA0A3P6GPD60.0A0A3P6GPD6_BRAOL; Uncharacterized protein
STRINGBo8g092430.10.0(Brassica oleracea)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM17532777
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58120.11e-137bZIP family protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  2. Gibalová A, et al.
    Characterization of pollen-expressed bZIP protein interactions and the role of ATbZIP18 in the male gametophyte.
    Plant Reprod, 2017. 30(1): p. 1-17
    [PMID:27896439]
  3. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]