PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cotton_A_23165_BGI-A2_v1.0 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Family | bZIP | ||||||||
Protein Properties | Length: 319aa MW: 35902.1 Da PI: 6.809 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 35.4 | 2.3e-11 | 179 | 224 | 5 | 50 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 kr +r NR +A+rsR RK+++i +Le+ v +L++e +aL ++ Cotton_A_23165_BGI-A2_v1.0 179 KRVKRILANRQSAQRSRVRKLQYISQLERSVTTLQTEVSALSPRVA 224 8999*********************************999987765 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 6.1E-13 | 175 | 239 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.565 | 177 | 229 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 7.5E-14 | 179 | 230 | No hit | No description |
Pfam | PF00170 | 5.7E-10 | 179 | 224 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.77E-11 | 179 | 233 | No hit | No description |
CDD | cd14703 | 1.51E-21 | 180 | 230 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 182 | 197 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 319 aa Download sequence Send to blast |
MAELPPKIPN ISQNWPSFPH DKMPSMANFF PSTITNHPSW VDEFLDFSSA RRGAHRRSMS 60 DSIAFLEQPL VEEECRDSNA MPMMTTTTVS NLNMFDRLDD DQLMSLFSDD IAVTMAASAP 120 TVSSSNPSTP TSSNNEEKTA PSTDLQQPKN EPGEVESTRK LSASEAPPSS NGDSIIDPKR 180 VKRILANRQS AQRSRVRKLQ YISQLERSVT TLQTEVSALS PRVAFLDHQR LILNVDNSAL 240 KQRIAALAQD KIFKDAHQEA LKKEIERLRQ VYQQQQNLKN MNTTTTNRHA LPSQQQQPPP 300 SSPPPPQNEE QLDQRKRES |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator. {ECO:0000269|PubMed:17719007}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_017617268.1 | 0.0 | PREDICTED: basic leucine zipper 34-like | ||||
Swissprot | Q9M2K4 | 1e-95 | BZP61_ARATH; Basic leucine zipper 61 | ||||
TrEMBL | A0A1U8II11 | 0.0 | A0A1U8II11_GOSHI; basic leucine zipper 34-like | ||||
STRING | Gorai.013G172500.1 | 0.0 | (Gossypium raimondii) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM1753 | 27 | 77 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G42380.2 | 1e-90 | bZIP family protein |
Publications ? help Back to Top | |||
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