PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Gh_D11G2955
Organism
Gossypium hirsutum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
Family bZIP
Protein Properties Length: 277aa    MW: 31294.1 Da    PI: 5.7176
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Gh_D11G2955genomeNAU-NBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_136.51.1e-11148196553
                  CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelk 53 
                  kr +r   NR +A+rsR RK+++i eLe+ v +L++e ++L  ++  l 
  Gh_D11G2955 148 KRVKRILANRQSAQRSRVRKLQYISELERSVTTLQTEVSTLSPRVAFLD 196
                  899***********************************99987776555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003388.4E-15144208IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.875146209IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1707.3E-14148200No hitNo description
PfamPF001703.6E-10148192IPR004827Basic-leucine zipper domain
SuperFamilySSF579595.49E-12148202No hitNo description
CDDcd147032.55E-22149199No hitNo description
PROSITE patternPS000360151166IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 277 aa     Download sequence    Send to blast
MPTMANFISS STTSTMMKDS NHQLSWADEF LDFSSMRRGA KRRSMSDFIA FLDQPLEEEN  60
RAGNAMMMEP NMFERLDDEQ LKSMFSDDVS LTMPATTMGS SSSTPLMSDQ NSNNDEKPTP  120
GEVESSYKLH ETQPPSTSNG GDPITDPKRV KRILANRQSA QRSRVRKLQY ISELERSVTT  180
LQTEVSTLSP RVAFLDHQRV VLTVENSALK QRIAALAQDK IFKDAHQEAL KKEIERLTQV  240
YQQQQSLKNM NDNHPPPPPQ QQQPLLPPPP NEGQLIS
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator. {ECO:0000269|PubMed:17719007}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012488308.10.0PREDICTED: basic leucine zipper 34-like
SwissprotQ9M2K45e-79BZP61_ARATH; Basic leucine zipper 61
TrEMBLA0A2P5QJV30.0A0A2P5QJV3_GOSBA; Uncharacterized protein
STRINGGorai.007G325700.10.0(Gossypium raimondii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM17532777
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58120.13e-81bZIP family protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  2. Gibalová A, et al.
    Characterization of pollen-expressed bZIP protein interactions and the role of ATbZIP18 in the male gametophyte.
    Plant Reprod, 2017. 30(1): p. 1-17
    [PMID:27896439]
  3. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]