PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM1563
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Subtree rooted at node 147: /----- Csa10g027960.1 [Camelina sativa] (2) /-100+ | \----- Csa11g031260.1 [Camelina sativa] (81) /-58-+ | | /----- Cagra.3356s0035.1.p [Capsella grandiflora] (5) | \-59-+ /--76-+ \----- Carubv10005434m [Capsella rubella] (14) | | | \--------------- Csa12g048260.1 [Camelina sativa] (10) | /------66------+--------------------- AT4G17460.1 [Arabidopsis thaliana] (6) | | | | /----- Bostr.30275s0201.1.p [Boechera stricta] (17) | \-------99------+ | \----- 914971 [Arabidopsis lyrata] (29) | | /------------------------------- Tp7g16730 [Thellungiella parvula] (3) | | | | /-------------------------- KFK24548.1 [Arabis alpina] (20) | | | | | | /----- RrC6257_p2 [Raphanus raphanistrum] (23) /-100+ | | /---100---+ | | | | | \----- Rsa1.0_01949.1_g00003.1 [Raphanus sativus] (36) | | | | | | | | |----100---+ /----- GSBRNA2T00151088001 [Brassica napus] (33) | | | | | /-100+ | | | | | | \----- XP_009136844.1 [Brassica rapa] (76) | | | | \-100+ | | | | | /----- XP_013595686.1 [Brassica oleracea] (34) | | | | \-100+ | | |-58-+ \----- GSBRNA2T00031269001 [Brassica napus] (62) | \-96-+ | | | | /----- XP_013637658.1 [Brassica oleracea] (38) | | | /-100+ | | | | \----- GSBRNA2T00003439001 [Brassica napus] (72) /-------97------+ | | | | | | | /-100+---------- XP_009144501.1 [Brassica rapa] (49) | | | | | | | | | | | \---------- GSBRNA2T00058728001 [Brassica napus] (79) | | | | /-100-+ | | | | | | /----- Rsa1.0_00326.1_g00023.1 [Raphanus sativus] (70) | | | | | \---100---+ | | | \-97-+ \----- RrC5602_p1 [Raphanus raphanistrum] (84) | | | | | | | \--------------------- 676728430 [Sisymbrium irio] (66) | | | | | \------------------------------- Thhalv10025921m [Eutrema salsugineum] (55) | | | \----------------------------------------- AA57G00018 [Aethionema arabicum] (27) | | /----- Gh_D08G1807 [Gossypium hirsutum] (4) | /-99-+ | | \----- Gorai.004G195900.1 [Gossypium raimondii] (67) | /------100------+ | | | /----- Gh_A08G1509 [Gossypium hirsutum] (28) | | \-100+ | | \----- Cotton_A_26317_BGI-A2_v1.0 [Gossypium arboreum] (35) | | | | /---------- Gh_D12G2139 [Gossypium hirsutum] (8) | | | | /-80-+ /-67-+ /----- Gh_A12G1960 [Gossypium hirsutum] (53) | | | | \-99-+ | | | /-100-+ \----- Cotton_A_07152_BGI-A2_v1.0 [Gossypium arboreum] (83) | | | | | | | | | \--------------- Gorai.008G233200.1 [Gossypium raimondii] (50) | | | | | | \-81-+ /----- Gorai.007G029200.1 [Gossypium raimondii] (24) | /-99-+ | /-100+ | | | | | \----- Gh_D11G0266 [Gossypium hirsutum] (64) | | | \----100---+ | | | | /----- Gh_A11G2970 [Gossypium hirsutum] (58) | | | \-100+ | | | \----- Cotton_A_09138_BGI-A2_v1.0 [Gossypium arboreum] (82) /-100+ /-56-+ | | | | | \------------------------------- Thecc1EG015919t1 [Theobroma cacao] (18) | | | | | | | | /---------- Ciclev10021374m [Citrus clementina] (51) | | | | | | | /-53-+ \------------70-----------+ /----- Eucgr.E00400.1.p [Eucalyptus grandis] (73) | | | | \-68-+ | | | | \----- Neem_1266_f_5 [Azadirachta indica] (77) | | | | | | | \----------------------------------------- evm.model.supercontig_89.64 [Carica papaya] (43) | | | | | | /----- AT4G16780.1 [Arabidopsis thaliana] (12) | | | /-99-+ | | | | \----- Araha.49827s0001.1.p [Arabidopsis halleri] (32) | | | /-80-+ | | | | \---------- KFK22263.1 [Arabis alpina] (13) | | | /--82-+ | | | | \--------------- Bostr.30275s0139.1.p [Boechera stricta] (78) | | | | | | | | /---------- Csa11g032920.1 [Camelina sativa] (16) | | | /-74-+ | | | | | | /-100+ /----- Csa12g050930.1 [Camelina sativa] (31) | | | | | | \-97-+ | | | | | | \----- Csa10g028730.1 [Camelina sativa] (46) | | | | \-100-+ | | /-100-+ | | /----- Cagra.0812s0021.1.p [Capsella grandiflora] (65) | | | | | \---100---+ --84-+ | | | | \----- Carubv10005275m [Capsella rubella] (89) | | | | | | | | | /-100+ /---------- XP_009145468.1 [Brassica rapa] (15) | | | | | | | | | | | | | |---------- XP_013610091.1 [Brassica oleracea] (61) | | | | | | /-100+ | | | | | | | | /----- Rsa1.0_00235.1_g00008.1 [Raphanus sativus] (63) | | | | | | | \-100+ | | | | | | /--82-+ \----- RrC9430_p1 [Raphanus raphanistrum] (74) | | | | /-100+ | | | | | | | | | | | \--------------- 676788896 [Sisymbrium irio] (85) | \-99-+ | | | \-100+ | | | | | | /----- Tp7g17330 [Thellungiella parvula] (26) | | | | | \-------53------+ | | | /-100+ | \----- Thhalv10025903m [Eutrema salsugineum] (87) | | | | | | | | | | | \------------------------------- AA53G00281 [Aethionema arabicum] (42) | | | | | | | \-66-+ | /----- XP_010538408.1 [Tarenaya hassleriana] (41) | | | \--------------82--------------+ | | | \----- XP_010531658.1 [Tarenaya hassleriana] (68) | | | | | \----------------------------------------- Eucgr.D02105.1.p [Eucalyptus grandis] (71) | | | \---------------------------------------------------- XP_010529979.1 [Tarenaya hassleriana] (19) | \-------------------------------------------------------------- AA251G00004 [Aethionema arabicum] (7) Subtree rooted at node 169: /----- (147) /--------------85--------------+ | \----- KFK31383.1 [Arabis alpina] (47) | | /----- Carubv10026931m [Capsella rubella] (9) | /---100---+ | | \----- Cagra.7985s0003.1.p [Capsella grandiflora] (54) | | | /--74-+ /----- Csa11g064380.1 [Camelina sativa] (30) /-94-+ | | /-100+ | | | | | \----- Csa18g002440.1 [Camelina sativa] (37) | | /-83-+ \-99-+ | | | | \---------- Csa20g081840.1 [Camelina sativa] (44) | | | | | | /-77-+ \--------------------- Bostr.14419s0034.1.p [Boechera stricta] (80) | | | | /-93-+ | | \-------------------------- AT5G47370.1 [Arabidopsis thaliana] (69) | | \-83-+ | | | /----- Araha.0879s0003.1.p [Arabidopsis halleri] (45) | | \-----------100-----------+ | | \----- 494245 [Arabidopsis lyrata] (56) | | | \----------------------------------------- Thhalv10000990m [Eutrema salsugineum] (57) /--70-+ | | /----- GSBRNA2T00033492001 [Brassica napus] (39) | | /-100+ | | | \----- XP_013609037.1 [Brassica oleracea] (48) | | /-96-+ | | | | /----- GSBRNA2T00072357001 [Brassica napus] (75) | | | \-93-+ /-100+ \--------------75--------------+ \----- XP_009114283.1 [Brassica rapa] (88) | | | | | | /----- RrC5809_p3 [Raphanus raphanistrum] (86) | | \---100---+ /-100+ | \----- Rsa1.0_01376.1_g00001.1 [Raphanus sativus] (90) | | | | | \---------------------------------------------------- Tp2g12090 [Thellungiella parvula] (25) | | --99-+ \--------------------------------------------------------- 676729358 [Sisymbrium irio] (59) | | /---------- Rsa1.0_41043.1_g00001.1 [Raphanus sativus] (21) | | \------------------------100------------------------+ /----- RrC305_p3 [Raphanus raphanistrum] (52) \-51-+ \----- Rsa1.0_09218.1_g00001.1 [Raphanus sativus] (60) Root part of tree: /------------------------------------------------------------------- GSBRNA2T00042542001 [Brassica napus] (1) | | /--------------------------------- (169) |----------------99---------------+ + \--------------------------------- XP_009101427.1 [Brassica rapa] (40) | | /--------------------------------- GSBRNA2T00128798001 [Brassica napus] (11) \----------------96---------------+ \--------------------------------- XP_013593815.1 [Brassica oleracea] (22) |