PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for
Raphanus sativus
GRAS FamilyPhylogenetic tree for domain ? help Back to Top |
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Subtree rooted at node 112: /--------------- Rsa1.0_01272.1_g00004.1/250-626 (2) | | /---------- Rsa1.0_03809.1_g00002.1/322-698 (13) /-100-+ | | | |---------- Rsa1.0_03809.1_g00003.1/312-570 (18) | \-100+ | | /----- Rsa1.0_00936.1_g00003.1/341-719 (35) | \-60-+ /-99-+ \----- Rsa1.0_03809.1_g00003.1/569-654 (42) | | | | /---------- Rsa1.0_00009.1_g00045.1/387-757 (11) | | | /-100+ \----100---+ /----- Rsa1.0_01272.1_g00005.1/341-710 (26) | | \-100+ | | \----- Rsa1.0_00159.1_g00036.1/344-717 (29) | | /------100-----+ \-------------------------- Rsa1.0_03967.1_g00001.1/294-663 (39) | | | | /---------- Rsa1.0_01945.1_g00004.1/197-571 (30) | | | | \---------100--------+ /----- Rsa1.0_01430.1_g00012.1/234-604 (46) | \-100+ | \----- Rsa1.0_03378.1_g00001.1/195-565 (51) | | /---------- Rsa1.0_01442.1_g00001.1/131-291 (3) | | | /-99-+ /----- Rsa1.0_19218.1_g00001.1/1-224 (15) | | \-99-+ | | \----- Rsa1.0_01285.1_g00014.1/175-538 (44) | /-----------100-----------+ | | | /---------- Rsa1.0_01442.1_g00001.1/292-459 (22) | | | | | | \-99-+ /----- Rsa1.0_00118.1_g00012.1/220-580 (43) | | \-100+ | | \----- Rsa1.0_00724.1_g00003.1/210-570 (47) | | | | /----- Rsa1.0_01244.1_g00008.1/273-632 (4) | | /---100---+ | | | \----- Rsa1.0_01514.1_g00004.1/232-589 (49) | | | |-100+ /---------100--------+ /----- Rsa1.0_02701.1_g00001.1/41-96 (7) | | | | /-100+ | | | | | \----- Rsa1.0_04207.1_g00001.1/27-82 (8) | | | \-100+ | | | \---------- Rsa1.0_00350.1_g00007.1/39-396 (10) | | | | | | /----- Rsa1.0_30641.1_g00001.1/39-232 (12) | | | /-99-+ | | | | \----- Rsa1.0_06830.1_g00003.1/237-430 (24) | | | /-52-+ | | | | \---------- Rsa1.0_06996.1_g00001.1/155-497 (37) | \-97-+ /-100-+ | | | \--------------- Rsa1.0_06830.1_g00003.1/434-505 (25) | | /----65---+ | | | | /----- Rsa1.0_01556.1_g00002.1/13-338 (20) /-100-+ | | \-------98------+ | | | | \----- Rsa1.0_03359.1_g00001.1/103-475 (27) | | | | | | | | /----- Rsa1.0_00037.1_g00020.1/125-489 (19) | | | | /------100------+ | | | | | \----- Rsa1.0_02830.1_g00004.1/124-488 (31) | | \-85-+ | | | | | /----- Rsa1.0_01094.1_g00004.1/236-601 (23) | | | /-100+ /-100+ | | | | | | \----- Rsa1.0_01373.1_g00003.1/239-595 (34) | | | | | /-100+ | | | | | | \---------- Rsa1.0_00693.1_g00004.1/224-587 (28) | | | | \-100-+ | | | | \--------------- Rsa1.0_03244.1_g00001.1/208-574 (54) | | \-86-+ | | | /---------- Rsa1.0_00778.1_g00015.1/52-441 (32) | | | | | | | /-100+ /----- Rsa1.0_00658.1_g00003.1/52-433 (38) | | | | \-100+ | | | | \----- Rsa1.0_03795.1_g00002.1/54-441 (53) | | \----55----+ | | | /----- Rsa1.0_01006.1_g00012.1/259-631 (45) | | \---100---+ | | \----- Rsa1.0_00866.1_g00005.1/274-645 (50) /-55-+ | | | | /----- Rsa1.0_02123.1_g00006.1/128-498 (5) | | | /-96-+ | | | | \----- Rsa1.0_05821.1_g00001.1/131-488 (59) | | | /-100+ | | | | \---------- Rsa1.0_00323.1_g00019.1/125-495 (41) | | | /--99-+ | | | | | /----- Rsa1.0_05938.1_g00001.1/165-533 (14) | | | | \---100---+ | | | /-100+ \----- Rsa1.0_00856.1_g00007.1/143-513 (16) | | | | | | | | | \--------------------- Rsa1.0_00288.1_g00010.1/148-519 (48) | | | /-51-+ | | | | | /----- Rsa1.0_00067.1_g00044.1/201-571 (6) | | | | \---------100--------+ /-100+ | \------100-----+ \----- Rsa1.0_00878.1_g00011.1/164-535 (55) | | | | | | | | /----- Rsa1.0_08802.1_g00001.1/60-436 (52) | | | \-----------100-----------+ | | | \----- Rsa1.0_11966.1_g00001.1/60-231 (58) | | | | | | /---------- Rsa1.0_01053.1_g00002.1/145-528 (40) | | | | | | | |---------- Rsa1.0_00403.1_g00013.1/140-262 (56) --100+ | \-------------------100-------------------+ | | | /----- Rsa1.0_00792.1_g00013.1/2-222 (57) | | \-64-+ | | \----- Rsa1.0_00712.1_g00004.1/145-528 (60) | | | \--------------------------------------------------------- Rsa1.0_00032.1_g00025.1/148-513 (33) | | /----- Rsa1.0_01791.1_g00001.1/31-220 (9) \---------------------------63---------------------------+ \----- Rsa1.0_03756.1_g00004.1/2-169 (17) Root part of tree: /------------------------------------------------------------------- Rsa1.0_41853.1_g00001.1/4-176 (1) | |------------------------------------------------------------------- Rsa1.0_01079.1_g00008.1/29-415 (36) + | /--------------------------------- (112) \----------------64---------------+ \--------------------------------- Rsa1.0_75077.1_g00001.1/1-100 (21) |
Phylogenetic tree for protein ? help Back to Top |
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Subtree rooted at node 102: /---------- Rsa1.0_00693.1_g00004.1 (2) | /-100+ /----- Rsa1.0_01094.1_g00004.1 (12) | \-100+ /-100-+ \----- Rsa1.0_01373.1_g00003.1 (31) | | | \--------------- Rsa1.0_03244.1_g00001.1 (18) /-100+ | | /----- Rsa1.0_00037.1_g00020.1 (33) | \------100------+ | \----- Rsa1.0_02830.1_g00004.1 (54) | /-61-+ /----- Rsa1.0_00658.1_g00003.1 (16) | | /-98-+ | | | \----- Rsa1.0_03795.1_g00002.1 (30) | | /-100+ | | | \---------- Rsa1.0_00778.1_g00015.1 (47) | \----69----+ | | /----- Rsa1.0_00866.1_g00005.1 (28) /-84-+ \---100---+ | | \----- Rsa1.0_01006.1_g00012.1 (37) | | | | /----- Rsa1.0_00724.1_g00003.1 (21) | | /---100---+ | | | \----- Rsa1.0_00118.1_g00012.1 (56) | | | | \------100------+ /----- Rsa1.0_19218.1_g00001.1 (43) | | /-100+ | | | \----- Rsa1.0_01285.1_g00014.1 (48) | \-82-+ /-51-+ \---------- Rsa1.0_01442.1_g00001.1 (57) | | | | /----- Rsa1.0_01556.1_g00002.1 (5) | |--------------97--------------+ | | \----- Rsa1.0_03359.1_g00001.1 (40) | | | | /----- Rsa1.0_02701.1_g00001.1 (10) | | /-100+ | | | \----- Rsa1.0_04207.1_g00001.1 (23) | | /-100+ /-100+ | | \---------- Rsa1.0_00350.1_g00007.1 (50) | | \---------100--------+ | | | /----- Rsa1.0_01244.1_g00008.1 (15) | | \---100---+ | | \----- Rsa1.0_01514.1_g00004.1 (19) | | | | /----- Rsa1.0_06830.1_g00003.1 (39) | | /-100+ | | | \----- Rsa1.0_30641.1_g00001.1 (42) | \--------------100-------------+ /--55-+ \---------- Rsa1.0_06996.1_g00001.1 (41) | | | | /----- Rsa1.0_08802.1_g00001.1 (3) | | /-----------100-----------+ | | | \----- Rsa1.0_11966.1_g00001.1 (22) | | | | | | /--------------------- Rsa1.0_00288.1_g00010.1 (4) | | | | | | | | /----- Rsa1.0_05938.1_g00001.1 (14) | \------100-----+ /-100+ /---100---+ | | | | | \----- Rsa1.0_00856.1_g00007.1 (53) | | | | | | | | \--68-+ /----- Rsa1.0_02123.1_g00006.1 (35) | | | | /-86-+ | \-85-+ | | \----- Rsa1.0_00323.1_g00019.1 (44) | | \-100+ | | \---------- Rsa1.0_05821.1_g00001.1 (38) | | /-55-+ | /----- Rsa1.0_00878.1_g00011.1 (36) | | \---------100--------+ | | \----- Rsa1.0_00067.1_g00044.1 (52) | | | | /---------- Rsa1.0_01791.1_g00001.1 (7) | | | | | /----100---+ /----- Rsa1.0_75077.1_g00001.1 (11) | | | | | | | | \-100+----- Rsa1.0_01079.1_g00008.1 (17) | | | | | | | \----- Rsa1.0_41853.1_g00001.1 (45) | | | | | | /--------------- Rsa1.0_00403.1_g00013.1 (24) /-64-+ | /-50-+ | | | | | |-100-+ /---------- Rsa1.0_00712.1_g00004.1 (25) | | | | | | | | | | | | \-81-+ /----- Rsa1.0_01053.1_g00002.1 (27) | | | | | \-61-+ | | \------------50-----------+ | \----- Rsa1.0_00792.1_g00013.1 (46) | | | | | | | \--------------------- Rsa1.0_00032.1_g00025.1 (51) | | | --78-+ | \-------------------------- Rsa1.0_03756.1_g00004.1 (32) | | | | /---------- Rsa1.0_01945.1_g00004.1 (6) | | | | \----------------------100---------------------+ /----- Rsa1.0_03378.1_g00001.1 (9) | \-100+ | \----- Rsa1.0_01430.1_g00012.1 (49) | \-------------------------------------------------------------- Rsa1.0_03967.1_g00001.1 (13) Root part of tree: /------------------------------------------------------------------- Rsa1.0_00936.1_g00003.1 (1) | | /---------------------------------------- (102) | | | | /------------- Rsa1.0_00159.1_g00036.1 (8) | /-----100-----+ /------93-----+ | | | | \------------- Rsa1.0_01272.1_g00005.1 (29) + | \-----93-----+ |-----100----+ \--------------------------- Rsa1.0_00009.1_g00045.1 (20) | | | \------------------------------------------------------ Rsa1.0_01272.1_g00004.1 (26) | | /------------- Rsa1.0_03809.1_g00003.1 (34) \-------------------------100-------------------------+ \------------- Rsa1.0_03809.1_g00002.1 (55) |