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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Rsa1.0_08802.1_g00001.1 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus
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| Family |
GRAS |
| Protein Properties |
Length: 436aa MW: 46940.9 Da PI: 5.2326 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Rsa1.0_08802.1_g00001.1 | genome | RGD | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 360.4 | 2.7e-110 | 60 | 436 | 2 | 374 |
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsev 87
+++++e+A+a+++g++e a+++Lar+ ++ s+++++ ++l+ +++ AL++r++ + +++++++ +e++++++l++e+
Rsa1.0_08802.1_g00001.1 60 RQTVFEIATAIAEGKTEIASEILARVPQTPSQRRNSEEKLVDFMVTALRSRINP------A--AAESSAQLYGKEHVTSTQLLYEL 137
68899************************************************9......2..223333334999*********** PP
GRAS 88 sPilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRp...egppslRiTgvgspesg........skeeleetg 162
sP++k+++++aN aIl+a + ++ H++Df+i++G+Q+++Ll+aL++R+ ++pp ++iT+v + + g + +l+++g
Rsa1.0_08802.1_g00001.1 138 SPCFKLGFMAANLAILDANDDATSFHVVDFEIGEGGQYVNLLHALSTRRsgkKNPPVVKITAVTNVSDGfsvagsdrGEGRLKTVG 223
**********************************************999776779**********8888999*9999999****** PP
GRAS 163 erLakfAeelgvpfefnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadh 248
+rL+++ ++lg++++fnv++ rl+ l+ e+L ++p+E laVnl+++l+r++desv++e++rde+L+ vk+l+P vv++ve+e++
Rsa1.0_08802.1_g00001.1 224 DRLSELGDRLGISLKFNVVAGLRLSGLSRESLGCDPEEPLAVNLAFKLYRVPDESVCMENPRDELLRRVKGLNPSVVTLVEEEMNS 309
******************9888**************************************************************** PP
GRAS 249 nsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaa 334
n+++Fl r++e++ +y al+ds+e+++p+ +++r+ vE+ +gr++ n+vaceg +r+er+e ++kWr+r+++aGF+ +p+sek+a
Rsa1.0_08802.1_g00001.1 310 NTAPFLGRVSESCACYGALLDSVESTVPSSNSDRARVEEG-IGRKLINAVACEGIDRVERCEVFGKWRMRMSMAGFELMPVSEKIA 394
****************************************.********************************************* PP
GRAS 335 kqaklllrkvk..sdgyrveeesgslvlgWkdrpLvsvSaWr 374
+ +k+ l++ + g++v+ee+g +++gW++r+L ++SaWr
Rsa1.0_08802.1_g00001.1 395 EAMKSRLSNGNrvHPGFTVKEENGGVCFGWMGRTLAVASAWR 436
*****9998777789**************************8 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 436 aa
Download sequence Send
to blast |
DEGGDDDVSV ITHSNSDWLH GLMTPNPNPN PVLSSSSPSS SSSSSSPSTA STTTSVACSR 60
QTVFEIATAI AEGKTEIASE ILARVPQTPS QRRNSEEKLV DFMVTALRSR INPAAAESSA 120
QLYGKEHVTS TQLLYELSPC FKLGFMAANL AILDANDDAT SFHVVDFEIG EGGQYVNLLH 180
ALSTRRSGKK NPPVVKITAV TNVSDGFSVA GSDRGEGRLK TVGDRLSELG DRLGISLKFN 240
VVAGLRLSGL SRESLGCDPE EPLAVNLAFK LYRVPDESVC MENPRDELLR RVKGLNPSVV 300
TLVEEEMNSN TAPFLGRVSE SCACYGALLD SVESTVPSSN SDRARVEEGI GRKLINAVAC 360
EGIDRVERCE VFGKWRMRMS MAGFELMPVS EKIAEAMKSR LSNGNRVHPG FTVKEENGGV 420
CFGWMGRTLA VASAWR
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| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Probable transcription factor involved in plant development. {ECO:0000250}. |
