PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM5008
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Subtree rooted at node 78: /----- EcC054598.20 [Eucalyptus camaldulensis] (2) /-100+ | \----- Eucgr.J00574.1.p [Eucalyptus grandis] (42) /-------------------100-------------------+ | \---------- evm.model.supercontig_195.45 [Carica papaya] (27) | | /----- Gh_D09G1263 [Gossypium hirsutum] (4) | /-100+ | | \----- Gorai.006G149100.1 [Gossypium raimondii] (16) | /-100+ | | | /----- Cotton_A_13481_BGI-A2_v1.0 [Gossypium arboreum] (12) | | \-100+ | | \----- Gh_A09G1263 [Gossypium hirsutum] (37) | /-100-+ | | | /----- Gorai.009G396900.1 [Gossypium raimondii] (29) | | | /-100+ | | | | \----- Gh_D04G0880 [Gossypium hirsutum] (35) | | \-100+ | /-99-+ | /----- Cotton_A_39756_BGI-A2_v1.0 [Gossypium arboreum] (36) | | | \-100+ | | | \----- Gh_A04G0478 [Gossypium hirsutum] (45) /-100+ | | | | | \--------------------- Thecc1EG022950t1 [Theobroma cacao] (5) | | /-100+ | | | | /----- Gh_A01G1715 [Gossypium hirsutum] (6) | | | | /-100+ | | | | | \----- Cotton_A_02285_BGI-A2_v1.0 [Gossypium arboreum] (44) | | | \------100------+ | | /-99-+ | /----- Gh_D01G1966 [Gossypium hirsutum] (24) | | | | \-100+ | | | | \----- Gorai.002G234900.1 [Gossypium raimondii] (30) | | /-100+ | | | | | \------------------------------- Eucgr.A02588.1.p [Eucalyptus grandis] (20) | | | | /-100+ | | \------------------------------------ evm.model.supercontig_104.27 [Carica papaya] (15) | | | /-100+ | | | | | /----- orange1.1g005500m [Citrus sinensis] (21) | | | | | /-100+ | | | | | | \----- Ciclev10011201m [Citrus clementina] (43) | | \-100-+ \--------------100-------------+ | | | \---------- Neem_2841_f_1 [Azadirachta indica] (28) | | | | | | /----- XP_010543867.1 [Tarenaya hassleriana] (32) | | \-------------------100------------------+ | | \----- XP_010557975.1 [Tarenaya hassleriana] (40) | | | | /----- XP_010553582.1 [Tarenaya hassleriana] (10) | \------------------------100------------------------+ | \----- XP_010521016.1 [Tarenaya hassleriana] (25) --99-+ | /----- Cagra.0993s0106.1.p [Capsella grandiflora] (9) | /-100+ | | \----- Carubv10022772m [Capsella rubella] (48) | | | /-59-+---------- Bostr.23794s0501.1.p [Boechera stricta] (14) | | | | | \---------- Csa04g049390.1 [Camelina sativa] (50) |----------------------100---------------------+ | | /----- AT2G35940.1 [Arabidopsis thaliana] (13) | | | | \---100---+----- 482564 [Arabidopsis lyrata] (19) | | | \----- Araha.67312s0001.1.p [Arabidopsis halleri] (47) | \-------------------------------------------------------------- Thhalv10016349m [Eutrema salsugineum] (11) Root part of tree: /------------------------------------------------------------------- GSBRNA2T00141844001 [Brassica napus] (1) | |------------------------------------------------------------------- XP_009133059.1 [Brassica rapa] (38) | | /------------------------------ (78) | | | | /------- XP_013633564.1 [Brassica oleracea] (7) | | /--100--+ | /--50--+ | \------- GSBRNA2T00051416001 [Brassica napus] (18) | | | /--100-+ | | | | | /------- XP_009141535.1 [Brassica rapa] (34) | | | | \--100--+ | | \--100--+ \------- GSBRNA2T00069628001 [Brassica napus] (41) | /---98--+ | | | | \---------------------- Rsa1.0_02567.1_g00002.1 [Raphanus sativus] (39) + | | | | | /------- Tp4g18190 [Thellungiella parvula] (8) | | \-------------100-------------+ | | \------- 676787860 [Sisymbrium irio] (23) | /--100-+ | | | /--------------- GSBRNA2T00117126001 [Brassica napus] (3) | | | | | | | /--100-+ /------- XP_013636674.1 [Brassica oleracea] (17) | | | | \--100--+ | | | | \------- GSBRNA2T00141208001 [Brassica napus] (49) | /--100--+ \----------100---------+ | | | | /------- RrC3421_p2 [Raphanus raphanistrum] (22) | | | \------100-----+ | | | \------- Rsa1.0_00479.1_g00013.1 [Raphanus sativus] (46) \--100-+ | | \---------------------------------------------------- RrC10235_p1 [Raphanus raphanistrum] (26) | | /------- XP_013629804.1 [Brassica oleracea] (31) \-------------------------100------------------------+ \------- GSBRNA2T00132433001 [Brassica napus] (33) |