PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM2680
Phylogenetic tree for protein ? help Back to Top |
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Subtree rooted at node 122: /----- GSBRNA2T00067929001 [Brassica napus] (2) /-70-+ | \----- XP_013625585.1 [Brassica oleracea] (25) /-100+ | | /----- XP_009109443.1 [Brassica rapa] (27) | \-100+ /----67----+ \----- GSBRNA2T00150956001 [Brassica napus] (51) | | | | /----- RrC1536_p3 [Raphanus raphanistrum] (6) | \---100---+ | \----- Rsa1.0_00116.1_g00034.1 [Raphanus sativus] (43) | | /--------------- XP_009127404.1 [Brassica rapa] (5) | | | /-100-+ /---------- GSBRNA2T00074013001 [Brassica napus] (8) | | | | | | \-67-+ /----- XP_013638280.1 [Brassica oleracea] (32) | | \-100+ /-96-+-100+ \----- GSBRNA2T00131242001 [Brassica napus] (44) | | | | | | /----- RrC6384_p2 [Raphanus raphanistrum] (34) | | \------100------+ | | \----- Rsa1.0_01670.1_g00004.1 [Raphanus sativus] (37) | | | | /----- XP_013593499.1 [Brassica oleracea] (11) | | /-100+ | | | \----- GSBRNA2T00100247001 [Brassica napus] (64) /-99-+ | /-100+ | | | | | /----- GSBRNA2T00050125001 [Brassica napus] (21) | | | | \-100+ | | \----100---+ \----- XP_009138555.1 [Brassica rapa] (54) | | | | | | /----- RrC1850_p4 [Raphanus raphanistrum] (57) /-93-+ | \---100---+ | | | \----- Rsa1.0_08685.1_g00001.1 [Raphanus sativus] (65) | | | | | \------------------------------- 676744004 [Sisymbrium irio] (67) /-100+ | | | \------------------------------------ Tp7g36120 [Thellungiella parvula] (15) | | /-100-+ \----------------------------------------- Thhalv10025958m [Eutrema salsugineum] (59) | | | \---------------------------------------------- KFK30541.1 [Arabis alpina] (36) | | /----- Csa11g002900.1 [Camelina sativa] (3) | /-63-+ | | \----- Csa12g002680.1 [Camelina sativa] (4) | /-100+ /-99-+ | \---------- Csa10g002580.1 [Camelina sativa] (61) | | | | | /-100-+ /----- Carubv10007787m [Capsella rubella] (13) | | | | /-100+ | | | | | \----- Cagra.5414s0001.1.p [Capsella grandiflora] (31) | | | \-77-+ | | | \---------- Bostr.25542s0167.1.p [Boechera stricta] (68) | \--------------100-------------+ | | /----- Araha.53452s0001.1.p [Arabidopsis halleri] (23) | | /-95-+ | | | \----- 490762 [Arabidopsis lyrata] (26) | \----100---+ | \---------- AT4G39780.1 [Arabidopsis thaliana] (66) | | /----- Gorai.007G240700.1 [Gossypium raimondii] (7) | /----99---+ | | \----- Gh_D11G2202 [Gossypium hirsutum] (38) | | | /-100-+ /----- Cotton_A_35227_BGI-A2_v1.0 [Gossypium arboreum] (19) | | | /-100+ | | | | \----- Cotton_A_35228_BGI-A2_v1.0 [Gossypium arboreum] (52) | /-87-+ \-100+ | | | \---------- Gh_A11G1833 [Gossypium hirsutum] (29) | | | | | \--------------------- Thecc1EG001147t1 [Theobroma cacao] (40) /-100+ | | | /-72-+ /----- Eucgr.I00422.1.p [Eucalyptus grandis] (47) | | | | /-99-+ | | | | | \----- Eucgr.L03532.1.p [Eucalyptus grandis] (58) | | | | /-100+ | | | | | \---------- EcS736150.10 [Eucalyptus camaldulensis] (60) | | | \----95----+ | | /-98-+ \--------------- evm.model.supercontig_996.1 [Carica papaya] (56) | | | | | | | | /----- Cotton_A_26719_BGI-A2_v1.0 [Gossypium arboreum] (30) | | | | /-83-+ | | | | | \----- Gh_A02G1382 [Gossypium hirsutum] (50) | | | \---------100--------+ | | /-100+ | /----- Gorai.003G038200.1 [Gossypium raimondii] (33) | | | | \-97-+ | | | | \----- Gh_D03G0342 [Gossypium hirsutum] (46) | | | | | | | | /----- Ciclev10025961m [Citrus clementina] (9) | |-------99------+ \--------------100-------------+ --86-+ | | \----- orange1.1g018103m [Citrus sinensis] (49) | | | | | | /----- XP_010531386.1 [Tarenaya hassleriana] (28) | | \----------------100----------------+ | | \----- XP_010526650.1 [Tarenaya hassleriana] (48) | | | \--------------------------------------------------------- AA30G00360 [Aethionema arabicum] (20) | | /----- Csa16g043950.1 [Camelina sativa] (16) | /-52-+ | | \----- Csa07g052310.1 [Camelina sativa] (39) | /-100+ | | \---------- Csa09g086530.1 [Camelina sativa] (18) | /-100-+ | | \--------------- Carubv10025369m [Capsella rubella] (62) | /-99-+ | | \--------------------- Bostr.5022s0013.1.p [Boechera stricta] (63) | | \-----------------97----------------+ /----- Araha.3205s0001.1.p [Arabidopsis halleri] (17) | /-100+ | | \----- 900671 [Arabidopsis lyrata] (53) \-------97------+ \---------- AT2G22200.1 [Arabidopsis thaliana] (41) Root part of tree: /------------------------------------------------------------------- XP_009140335.1 [Brassica rapa] (1) | |------------------------------------------------------------------- GSBRNA2T00032840001 [Brassica napus] (35) | | /----------- (122) | /----100---+ | | \----------- KFK32834.1 [Arabis alpina] (45) | /----100---+ + | | /----------- Thhalv10000302m [Eutrema salsugineum] (10) | | \----54----+ | /----100----+ \----------- 676746666 [Sisymbrium irio] (55) | | | | | \--------------------------------- Tp4g01260 [Thellungiella parvula] (22) | /----100---+ | | | /----------- Rsa1.0_01225.1_g00002.1 [Raphanus sativus] (14) | | \---------------100---------------+ \----100---+ \----------- RrC25501_p1 [Raphanus raphanistrum] (42) | | /----------- XP_013635195.1 [Brassica oleracea] (12) \---------------------100--------------------+ \----------- GSBRNA2T00149695001 [Brassica napus] (24) |