PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM2209
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Subtree rooted at node 131: /---------- AT2G20570.2 [Arabidopsis thaliana] (4) | /------100------+ /----- Araha.2771s0001.1.p [Arabidopsis halleri] (49) | \-97-+ | \----- 480887 [Arabidopsis lyrata] (53) | /---100---+ /--------------------- Bostr.7903s0106.1.p [Boechera stricta] (5) | | | | | | /----- Cagra.2516s0014.1.p [Capsella grandiflora] (17) | \-100+ /---100---+ | | | \----- Carubv10014114m [Capsella rubella] (36) | | | | \-100-+ /---------- Csa15g082460.1 [Camelina sativa] (32) | | | | \-100+ /----- Csa19g048140.1 [Camelina sativa] (38) | \-88-+ | \----- Csa01g043720.1 [Camelina sativa] (62) | | /----- GSBRNA2T00136942001 [Brassica napus] (8) | /-100+ | | \----- XP_013604997.1 [Brassica oleracea] (59) | /-100+ | | \---------- XP_009117480.1 [Brassica rapa] (25) /-69-+ /-100-+ | | | | /----- RrC42619_p1 [Raphanus raphanistrum] (34) | | | \---100---+ | | | \----- Rsa1.0_02916.1_g00005.1 [Raphanus sativus] (66) | | | | | | /----- GSBRNA2T00120845001 [Brassica napus] (22) | | /-99-+ /-100+ | | | | | \----- XP_013593044.1 [Brassica oleracea] (23) | | | | /-100+ | | | | | | /----- XP_009102012.1 [Brassica rapa] (63) | | | | | \-100+ | | | \-100-+ \----- GSBRNA2T00050744001 [Brassica napus] (64) /-100+ | /-100+ | | | | | | | /----- RrC19877_p1 [Raphanus raphanistrum] (24) | | | | | \---100---+ | | | | | \----- Rsa1.0_01323.1_g00007.1 [Raphanus sativus] (41) | | | | | | | \-59-+ | /----- 676748454 [Sisymbrium irio] (19) | | | \---------100--------+ /-100-+ | | \----- Tp3g33790 [Thellungiella parvula] (26) | | | | | | | \------------------------------- Thhalv10001986m [Eutrema salsugineum] (35) | | | /-100+ | \----------------------------------------- KFK40431.1 [Arabis alpina] (55) | | | | | \---------------------------------------------- AA33G00323 [Aethionema arabicum] (67) | | | \---------------------------------------------------- XP_010527147.1 [Tarenaya hassleriana] (28) | | /---------- Gh_A12G1283 [Gossypium hirsutum] (9) | | | /----100---+ /----- Gorai.008G155000.1 [Gossypium raimondii] (20) | | \-53-+ | | \----- Gh_D12G1405 [Gossypium hirsutum] (51) | | | | /----- Gh_A04G0879 [Gossypium hirsutum] (13) | /-72-+ /-90-+ | | | | \----- Cotton_A_14903_BGI-A2_v1.0 [Gossypium arboreum] (72) | | | /-100+ | | | | | /----- Gorai.012G126600.1 [Gossypium raimondii] (15) | | | | \-100+ /-100+ | \--98-+ \----- Gh_D04G1379 [Gossypium hirsutum] (27) | | | | | | /-100+ \--------------- Thecc1EG008193t1 [Theobroma cacao] (48) | | | | | | | | /---------- Gh_A01G0139 [Gossypium hirsutum] (21) | | | | | | | | | /-100+ /----- Cotton_A_00064_BGI-A2_v1.0 [Gossypium arboreum] (45) | | | | | \-100+ | | | | | \----- Cotton_A_00062_BGI-A2_v1.0 [Gossypium arboreum] (50) | | | \----100---+ | | /-100+ | /----- Gh_D01G0183 [Gossypium hirsutum] (40) | | | | \----96---+ | | | | \----- Gorai.002G020300.1 [Gossypium raimondii] (68) | | | | | | | | /----- Neem_14376_f_1 [Azadirachta indica] (31) --100+ | | | /-100+ | | | | | \----- Neem_21592_f_1 [Azadirachta indica] (65) | | | \---------100--------+ | \---------100--------+ | /----- orange1.1g013528m [Citrus sinensis] (46) | | \-100+ | | \----- Ciclev10015266m [Citrus clementina] (52) | | | | /----- EcS738175.10 [Eucalyptus camaldulensis] (11) | | /-100+ | | | \----- Eucgr.K01056.1.p [Eucalyptus grandis] (73) | \-----------100-----------+ | | /----- EcC026665.10 [Eucalyptus camaldulensis] (29) | \-100+ | \----- Eucgr.A01857.1.p [Eucalyptus grandis] (61) | \-------------------------------------------------------------- XP_010523175.1 [Tarenaya hassleriana] (12) Root part of tree: /------------------------------------------------------------------- Csa18g009590.1 [Camelina sativa] (1) | |------------------------------------------------------------------- Csa11g070500.1 [Camelina sativa] (6) | | /----- GSBRNA2T00018769001 [Brassica napus] (2) | /-100+ | | \----- XP_009101731.1 [Brassica rapa] (58) | /-100+ | | | /----- XP_013599405.1 [Brassica oleracea] (39) | | \-100+ | /-100-+ \----- GSBRNA2T00158205001 [Brassica napus] (54) | | | | | | /----- RrC6131_p1 [Raphanus raphanistrum] (43) | | \---100---+ | | \----- Rsa1.0_00650.1_g00009.1 [Raphanus sativus] (56) | /-96-+ | | | /----- Rsa1.0_00458.1_g00002.1 [Raphanus sativus] (3) | | | /---100---+ | | | | \----- RrC1405_p1 [Raphanus raphanistrum] (60) | | | | | | \-100-+ /---------- GSBRNA2T00103882001 [Brassica napus] (10) | /-100+ | | | | | \-100+ /----- XP_009123934.1 [Brassica rapa] (44) | | | \-100+ + | | \----- GSBRNA2T00084832001 [Brassica napus] (71) | /-97-+ | | | | \-------------------------- 676711000 [Sisymbrium irio] (70) | | | | | \------------------------------- Thhalv10003223m [Eutrema salsugineum] (14) | /-75-+ | | | /----- (131) | | | /-97-+ | | | | \----- AA32G00370 [Aethionema arabicum] (18) | /-100+ \------------77-----------+ | | | \---------- Tp2g09010 [Thellungiella parvula] (33) | | | | | \----------------------------------------- KFK31659.1 [Arabis alpina] (47) | /-100-+ | | | /---------- AT5G44190.1 [Arabidopsis thaliana] (7) | | | | | | \-----------------56----------------+ /----- 494575 [Arabidopsis lyrata] (30) | /-64-+ \-100+ | | | \----- Araha.0617s0003.1.p [Arabidopsis halleri] (42) | | | | /-100+ \---------------------------------------------------- Bostr.3148s0040.1.p [Boechera stricta] (69) | | | | | | /----- Carubv10026528m [Capsella rubella] (16) \-100+ \------------------------100------------------------+ | \----- Cagra.0381s0008.1.p [Capsella grandiflora] (57) | \-------------------------------------------------------------- Csa20g071220.1 [Camelina sativa] (37) |