PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EcS738175.10 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | G2-like | ||||||||
Protein Properties | Length: 214aa MW: 23693.3 Da PI: 10.5058 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 62.6 | 7.7e-20 | 1 | 44 | 11 | 55 |
G2-like 11 HerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 H++Fv+aveqL G +kA+P +ilelm+ ++L +++++SHLQkYR+ EcS738175.10 1 HRKFVQAVEQL-GVDKAVPTRILELMGNDSLNRHNIASHLQKYRS 44 9**********.********************************7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51294 | 12.766 | 1 | 47 | IPR017930 | Myb domain |
TIGRFAMs | TIGR01557 | 4.8E-18 | 1 | 45 | IPR006447 | Myb domain, plants |
Gene3D | G3DSA:1.10.10.60 | 1.3E-18 | 1 | 48 | IPR009057 | Homeodomain-like |
SuperFamily | SSF46689 | 2.15E-11 | 1 | 47 | IPR009057 | Homeodomain-like |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 214 aa Download sequence Send to blast |
HRKFVQAVEQ LGVDKAVPTR ILELMGNDSL NRHNIASHLQ KYRSQRRHLQ SLEADAARWS 60 KRRQIYSGAA AAGGGSKRVM TPWAAPAMGF PSAPPSVHHF RPLHVWGHPT LSPSLKHGAW 120 PLHSQPSLVP SPLPTWVPPP LLEHPPPPPP LPPPDPSYWH QQVSIGHPPE FHVISYISSS 180 DLARIRNNLG LSLLACHGHI LVFQAIDILV EILV |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcriptional activator that promotes chloroplast development. Acts as an activator of nuclear photosynthetic genes involved in chlorophyll biosynthesis, light harvesting, and electron transport. {ECO:0000269|PubMed:19808806}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: By light. {ECO:0000269|PubMed:11340194}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010035797.1 | 1e-110 | PREDICTED: transcription activator GLK2 | ||||
Swissprot | Q5Z5I4 | 7e-39 | GLK1_ORYSJ; Probable transcription factor GLK1 | ||||
TrEMBL | A0A059A0K2 | 1e-109 | A0A059A0K2_EUCGR; Uncharacterized protein | ||||
STRING | XP_010035797.1 | 1e-109 | (Eucalyptus grandis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM2209 | 27 | 73 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G44190.1 | 1e-35 | GOLDEN2-like 2 |
Publications ? help Back to Top | |||
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