PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEA1302
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Subtree rooted at node 109: /----- cra_locus_4692_iso_4 [Catharanthus roseus] (2) /-------------------100------------------+ | \----- Cc00_g00210 [Coffea canephora] (45) | | /----- Achn073331 [Actinidia chinensis] (13) | /-100+ | | \----- Achn023421 [Actinidia chinensis] (55) | /--------------100-------------+ | | \---------- DCAR_020464 [Daucus carota] (29) /--70-+ | | | | /----- 678457374 [Utricularia gibba] (18) | | | /-100+ | | | | \----- 678448784 [Utricularia gibba] (61) | | | /-100+ | | | | | /----- 678433664 [Utricularia gibba] (19) | | | | \-100+ | | | /-100-+ \----- 678462313 [Utricularia gibba] (23) | \-69-+ | | | | /-100+ \--------------- EPS64535.1 [Genlisea aurea] (40) | | | | | | /-100+ \--------------------- XP_011077666.1 [Sesamum indicum] (22) | | | | | | | \-------------------------- Migut.L01914.1.p [Mimulus guttatus] (52) | | /-70-+ | | | | /----- KZV49018.1 [Dorcoceras hygrometricum] (48) | | | \-----------100-----------+ | | | \----- KZV18270.1 [Dorcoceras hygrometricum] (49) | \-100+ | | /----- Ote100048140061 [Ocimum tenuiflorum] (25) | | /-100+ | | | \----- SMil_00020906-RA_Salv [Salvia miltiorrhiza] (26) | \-----------100-----------+ | \---------- XP_011094057.1 [Sesamum indicum] (64) | | /----- Peinf101Scf00296g07022.1 [Petunia inflata] (3) | /------100------+ | | \----- Peaxi162Scf00954g00314.1 [Petunia axillaris] (35) | | /-100+ | /----- XP_009768741.1 [Nicotiana sylvestris] (12) | | /-51-+ /-100+ | | | | | \----- XP_016481774.1 [Nicotiana tabacum] (58) | | | | /-100+ | | | | | \---------- Niben101Scf00981g04003.1 [Nicotiana benthamiana] (30) | | | \-100-+ | | | | /----- XP_009621049.1 [Nicotiana tomentosiformis] (47) | | | \---100---+ | | | \----- XP_016496088.1 [Nicotiana tabacum] (50) | | /-100+ | | | | /--------------- PGSC0003DMP400024204 [Solanum tuberosum] (6) | | | | | | | | | | /----- Solyc05g047460.2.1 [Solanum lycopersicum] (7) | | | | /-100-+ /-100+ | | | | | | | \----- Sopim05g047460.0.1 [Solanum pimpinellifolium] (24) | | | | | \-100+ | | | \-100+ \---------- Sopen05g027770.1 [Solanum pennellii] (41) | | | | | | | \--------------------- CA05g10920 [Capsicum annuum] (37) | | | | | /-100+ /--------------- CA07g07400 [Capsicum annuum] (4) /-83-+ | | | | | | | | | | /----- PGSC0003DMP400017257 [Solanum tuberosum] (10) | | | | | /-100-+ /-100+ | | | | | | | | \----- Solyc07g016180.2.1 [Solanum lycopersicum] (36) | | | | | | \-82-+ | | | | | /-78-+ \---------- Sme2.5_07559.1_g00001.1 [Solanum melongena] (38) | | | | | | | | | | | | | \--------------------- Peaxi162Scf00320g00212.1 [Petunia axillaris] (46) | | \-------57------+ | | | | | \-100+ /----- Niben101Scf03540g00021.1 [Nicotiana benthamiana] (17) | | | | /-99-+ | | | | | \----- XP_009762809.1 [Nicotiana sylvestris] (53) | | | \------100------+ | | | | /----- XP_009594540.1 [Nicotiana tomentosiformis] (20) | | | \-100+ --98-+ | | \----- XP_016515513.1 [Nicotiana tabacum] (65) | | | | | \------------------------------------ Itr_sc000391.1_g00001.1 [Ipomoea trifida] (43) | | | | /----- EPS64094.1 [Genlisea aurea] (8) | \------------------------100------------------------+ | \----- EPS73925.1 [Genlisea aurea] (21) | | /----- Ote100228140031 [Ocimum tenuiflorum] (14) | /-100+ | | \----- XP_011093873.1 [Sesamum indicum] (56) | /-65-+ | | \---------- Migut.J00900.1.p [Mimulus guttatus] (15) | /--82-+ | | \--------------- KZV47127.1 [Dorcoceras hygrometricum] (62) \-------------------83-------------------+ \--------------------- Migut.L01587.1.p [Mimulus guttatus] (60) Root part of tree: /------------------------------------------------------------------- cra_locus_5267_iso_9 [Catharanthus roseus] (1) | |------------------------------------------------------------------- Cc06_g12540 [Coffea canephora] (39) | | /---------------------- (109) | | | | /------- Achn167981 [Actinidia chinensis] (28) | /------------------98-----------------+ /--100--+ | | | | \------- Achn240341 [Actinidia chinensis] (31) | | \--100-+ | | \--------------- DCAR_011930 [Daucus carota] (51) + | | | /--------------- Sopen07g021880.1 [Solanum pennellii] (5) | | | | | /--100-+ /------- Sopim07g042260.0.1 [Solanum pimpinellifolium] (16) | | | \--100--+ | | /--100--+ \------- Solyc07g042260.2.1 [Solanum lycopersicum] (42) | | | | | | /--100-+ \---------------------- PGSC0003DMP400004262 [Solanum tuberosum] (59) | | | | | | | \------------------------------ CA07g06810 [Capsicum annuum] (34) \--100-+ | | | /---------------------- Niben101Scf02744g00012.1 [Nicotiana benthamiana] (9) | /--100--+ | | | | | /------- XP_009791842.1 [Nicotiana sylvestris] (33) | | | /--100--+ /--100--+ | | | | | | \------- XP_016514516.1 [Nicotiana tabacum] (54) | | | | \--99--+ | | \--100-+ \--------------- Niben101Scf08651g04004.1 [Nicotiana benthamiana] (57) | /--100-+ | | | | | /------- XP_009620963.1 [Nicotiana tomentosiformis] (27) | | | \----------100---------+ | | | \------- XP_016504097.1 [Nicotiana tabacum] (63) | | | \---98--+ | /------- Peaxi162Scf00547g00610.1 [Petunia axillaris] (32) | \-----------------100-----------------+ | \------- Peinf101Scf01480g11020.1 [Petunia inflata] (44) | \---------------------------------------------------- Itr_sc000134.1_g00059.1 [Ipomoea trifida] (11) |