PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM693
Phylogenetic tree for protein ? help Back to Top |
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Subtree rooted at node 206: /---------- AT2G01940.3 [Arabidopsis thaliana] (2) | /---100---+ /----- 484116 [Arabidopsis lyrata] (62) | \-99-+ | \----- Araha.2880s0001.1.p [Arabidopsis halleri] (131) | | /----- Carubv10017254m [Capsella rubella] (3) /---------100--------+ /-100+ | | | \----- Cagra.3834s0006.1.p [Capsella grandiflora] (41) | | /-73-+ | | | \---------- Bostr.0556s0022.1.p [Boechera stricta] (118) | \-85-+ | | /----- Csa06g001940.1 [Camelina sativa] (17) | \---100---+ | \----- Csa04g004310.1 [Camelina sativa] (111) | |----------------------------------------- KFK33408.1 [Arabis alpina] (4) | | /----- GSBRNA2T00030882001 [Brassica napus] (21) | /-100+ | | \----- XP_009129183.1 [Brassica rapa] (100) | /-98-+ /-78-+ | \---------- XP_013616621.1 [Brassica oleracea] (110) | | /-100+ | | | \--------------- GSBRNA2T00090106001 [Brassica napus] (180) | | /-100+ | | | | /----- RrC5218_p1 [Raphanus raphanistrum] (38) | | | \------100-----+ | | /----100---+ \----- Rsa1.0_01961.1_g00002.1 [Raphanus sativus] (122) | | | | | | | \------------------------- Tp2g13380 [Thellungiella parvula] (80) | | | | | | /----- GSBRNA2T00001830001 [Brassica napus] (31) | | | /-100+ | | | | \----- XP_009101285.1 [Brassica rapa] (124) | | | /-100+ | | | | | /----- XP_013594176.1 [Brassica oleracea] (37) | \-78-+ | \-100+ | | /-100+ \----- GSBRNA2T00028157001 [Brassica napus] (72) | | | | /-80-+ | /-75-+ \--------------- Rsa1.0_01554.1_g00002.1 [Raphanus sativus] (64) | | | | | | | | /-69-+ \-------------------- 676758230 [Sisymbrium irio] (121) | | | | | | | | | \------------------------- Thhalv10004221m [Eutrema salsugineum] (65) | | | | | | \--78-+ /----- Rsa1.0_04270.1_g00001.1 [Raphanus sativus] (32) | | | /---100---+ | | | | \----- RrC133_p1 [Raphanus raphanistrum] (50) | | | | | | \------100-----+ /----- XP_009114218.1 [Brassica rapa] (36) /-80-+ | | /-100+ | | | | | \----- GSBRNA2T00117744001 [Brassica napus] (127) | | | \-100+ | | | | /----- XP_013607262.1 [Brassica oleracea] (83) | | | \-100+ | | | \----- GSBRNA2T00040747001 [Brassica napus] (129) | | | | | \---------------------------------------------- AA53G00676 [Aethionema arabicum] (28) | | | | /----- XP_010554369.1 [Tarenaya hassleriana] (6) | \---------------------100---------------------+ | \----- XP_010523408.1 [Tarenaya hassleriana] (77) | | /----- orange1.1g037502m [Citrus sinensis] (9) | /-100+ | | \----- Ciclev10020125m [Citrus clementina] (115) | /-----------100-----------+ | | | /----- Neem_20212_f_1 [Azadirachta indica] (20) | | \-100+ | | \----- Neem_9054_f_1 [Azadirachta indica] (116) | | | | /----- Cotton_A_07623_BGI-A2_v1.0 [Gossypium arboreum] (13) | | /-100+ | | | \----- Gh_A11G0018 [Gossypium hirsutum] (92) | | /-50-+ | | | \---------- Gh_D11G0016 [Gossypium hirsutum] (58) | | /-100+ | | | \--------------- Gorai.007G002600.1 [Gossypium raimondii] (119) | | | | | /-88-+ /----- Gorai.005G134600.1 [Gossypium raimondii] (86) | | | | /-100+ | /-66-+ | | | \----- Gh_D02G1197 [Gossypium hirsutum] (114) | | | | \---100---+ | | | | | /----- Cotton_A_33418_BGI-A2_v1.0 [Gossypium arboreum] (117) | | | | \-92-+ | | | | \----- Gh_A03G0782 [Gossypium hirsutum] (125) | | | | | | | /-58-+ /---------- Gorai.006G190500.1 [Gossypium raimondii] (26) | | | | | | | | | | | |---------- Gh_D09G1639 [Gossypium hirsutum] (68) | | | | | /-100+ | | | | | | | /----- Gh_A09G1568 [Gossypium hirsutum] (91) | | | | | | \-100+ | | | | | | \----- Cotton_A_13065_BGI-A2_v1.0 [Gossypium arboreum] (113) | | | | | | /-99-+ | \--74-+ \----67---+ /----- Gorai.008G293000.1 [Gossypium raimondii] (35) | | /-87-+ | | /-100+ | | | | | | | \----- Gh_D12G2587 [Gossypium hirsutum] (60) | | | | | | | | | | | | \-100+---------- Gh_A12G2459 [Gossypium hirsutum] (69) | | | | | | | | | | | \---------- Cotton_A_01466_BGI-A2_v1.0 [Gossypium arboreum] (71) | | | | | | | | | \------------------------------ Thecc1EG039880t1 [Theobroma cacao] (22) | | | | | | | | /----- EcC049955.20 [Eucalyptus camaldulensis] (33) | | | | /-100+ | | | | | \----- Eucgr.H00574.1.p [Eucalyptus grandis] (84) | | | |--------------88--------------+ | | | | \---------- Eucgr.K02292.1.p [Eucalyptus grandis] (97) | | | | | | | \----------------------------------------- evm.model.supercontig_7.131 [Carica papaya] (140) | | | | | | /---------- Gh_D01G1332 [Gossypium hirsutum] (15) | | | | | | | |---------- Gorai.002G171100.1 [Gossypium raimondii] (49) | | | /---100---+ | | | | | /----- Cotton_A_39342_BGI-A2_v1.0 [Gossypium arboreum] (76) | | | | \-100+ | | | | \----- Gh_Sca004794G01 [Gossypium hirsutum] (96) | | | | | | /-91-+ | /----- Gorai.008G169500.1 [Gossypium raimondii] (18) | | | | | /-100+ | | | | | | \----- Gh_D12G1536 [Gossypium hirsutum] (56) | | | | | /-100+ | | | | | | \---------- Cotton_A_25548_BGI-A2_v1.0 [Gossypium arboreum] (130) | | | | | | | | | | |-91-+ /----- Gh_A03G0994 [Gossypium hirsutum] (23) --76-+ | | | | | /-82-+ | | | | | | | \----- Cotton_A_36496_BGI-A2_v1.0 [Gossypium arboreum] (123) | | | | /-100+ \-100+ | | | | | | | /----- Gh_D02G1382 [Gossypium hirsutum] (53) | | | | | | \-71-+ | | | | | | \----- Gorai.005G154300.1 [Gossypium raimondii] (54) | | | | | | | | | | | | /----- Gh_A05G2664 [Gossypium hirsutum] (24) | | | | | | /-100+ | | | | | | | \----- Cotton_A_26936_BGI-A2_v1.0 [Gossypium arboreum] (25) | | | | /-54-+ |---100---+ | \-84-+ | | | | | /----- Gorai.009G329200.1 [Gossypium raimondii] (57) | | | | | | \-100+ | | | | | | \----- Gh_D05G2965 [Gossypium hirsutum] (88) | | | | | | | | | | | \-------------------- Thecc1EG011210t1 [Theobroma cacao] (79) | | | | | | | \-------59------+ \------------------------- evm.model.supercontig_2.118 [Carica papaya] (82) | | | | | | /----- Neem_15713_f_1 [Azadirachta indica] (29) | | |-----------100----------+ | | | \----- Neem_3732_f_1 [Azadirachta indica] (170) | | | | | | /----- orange1.1g014184m [Citrus sinensis] (52) | | \-----------100----------+ | | \----- Ciclev10015315m [Citrus clementina] (93) | | | | /----- EcC064720.10 [Eucalyptus camaldulensis] (19) | \---------------------100---------------------+ | \----- Eucgr.G02066.1.p [Eucalyptus grandis] (39) | | /----- XP_010531697.1 [Tarenaya hassleriana] (34) \---------------------------87--------------------------+ \----- XP_010534167.1 [Tarenaya hassleriana] (74) Subtree rooted at node 238: /-------------------------------------------------------- (206) | | /---------- Bostr.15697s0010.1.p [Boechera stricta] (5) | | | | /----- Cagra.2231s0014.1.p [Capsella grandiflora] (30) | |-100+ | /-100+ \----- Carubv10009424m [Capsella rubella] (87) | | | | | | /----- Csa14g034270.1 [Camelina sativa] (42) | | \-100+ | /--------------100-------------+ \----- Csa17g035350.1 [Camelina sativa] (128) | | | | | | /----- AT1G25250.1 [Arabidopsis thaliana] (46) | | \---100---+ | | \----- 880976 [Arabidopsis lyrata] (59) | | | | /----- GSBRNA2T00142371001 [Brassica napus] (8) | | /-95-+ | | | \----- XP_013638956.1 [Brassica oleracea] (130) /-100+ | /-74-+ | | | | \---------- GSBRNA2T00028526001 [Brassica napus] (160) | | | /-100+ | | | | \--------------- XP_009115296.1 [Brassica rapa] (150) | | | /-100+ | | | | | /----- Rsa1.0_00050.1_g00021.1 [Raphanus sativus] (78) | | | | \------100-----+ | | /-99-+ /-100+ \----- RrC5691_p2 [Raphanus raphanistrum] (90) | | | | | | | | | | | \------------------------- 676772266 [Sisymbrium irio] (112) | | | | | | | | | /-100-+ /----- RrC10932_p1 [Raphanus raphanistrum] (10) | | | | | | /---100---+ | | | | | | | \----- Rsa1.0_07151.1_g00001.1 [Raphanus sativus] (95) | | | | | | | | | | | | \------100-----+ /----- XP_013623277.1 [Brassica oleracea] (11) | | | | | | /-100+ | | | | | | | \----- GSBRNA2T00004668001 [Brassica napus] (27) | \-99-+ | /-87-+ \-100+ | | | | | | /----- GSBRNA2T00059963001 [Brassica napus] (48) --72-+ | | | | \-100+ | | | | | \----- XP_009109864.1 [Brassica rapa] (126) | | | | | | | \-85-+ | /----- Tp1g23040 [Thellungiella parvula] (40) | | | \--------------67--------------+ | | | \----- Thhalv10009376m [Eutrema salsugineum] (94) | | | | | \----------------------------------------- KFK44536.1 [Arabis alpina] (47) | | | \--------------------------------------------------- AA39G00710 [Aethionema arabicum] (61) | | /----- 475906 [Arabidopsis lyrata] (12) | /-100+ | | \----- Araha.15555s0001.1.p [Arabidopsis halleri] (14) | /-100+ | | \---------- AT1G68130.1 [Arabidopsis thaliana] (55) | /-75-+ | | \--------------- Bostr.26959s0085.1.p [Boechera stricta] (110) | | | | /---------- Csa05g083180.1 [Camelina sativa] (63) \-------------------100------------------+ | | /-100+ /----- Csa07g033560.1 [Camelina sativa] (85) | | \-100+ | | \----- Csa16g028020.1 [Camelina sativa] (99) \-99-+ | /----- Cagra.1111s0006.1.p [Capsella grandiflora] (66) \---100---+ \----- Carubv10020337m [Capsella rubella] (190) Root part of tree: /------------------------------------------------------------------ GSBRNA2T00102083001 [Brassica napus] (1) | | /------------- XP_013588413.1 [Brassica oleracea] (16) | /-----100----+ | | \------------- XP_009105360.1 [Brassica rapa] (45) |-------------------74------------------+ | | /------------- Rsa1.0_01101.1_g00010.1 [Raphanus sativus] (75) | \-----99-----+ | \------------- RrC2816_p4 [Raphanus raphanistrum] (98) | + /------------- (238) | /-----70-----+ | | \------------- Thhalv10018614m [Eutrema salsugineum] (43) | /------65-----+ | | \-------------------------- Tp5g23130 [Thellungiella parvula] (67) | /-----53-----+ | | | /------------- KFK30658.1 [Arabis alpina] (51) | | \------------61------------+ | | \------------- 676771820 [Sisymbrium irio] (89) | | \-----53-----+ /------------- RrC6678_p1 [Raphanus raphanistrum] (7) | /------------100-----------+ | | \------------- Rsa1.0_00089.1_g00060.1 [Raphanus sativus] (81) | | | | /------------- GSBRNA2T00117912001 [Brassica napus] (44) \-----100----+ /-----100----+ | | \------------- XP_013588652.1 [Brassica oleracea] (70) | | \-----100-----+ /------------- GSBRNA2T00124385001 [Brassica napus] (73) | | \-----100----+------------- GSBRNA2T00117913001 [Brassica napus] (120) | \------------- XP_009105061.1 [Brassica rapa] (120) |