PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Phylogenetic Tree for OGEM2900
Phylogenetic tree for protein ? help Back to Top |
---|
Subtree rooted at node 106: /----- RrC10193_p1 [Raphanus raphanistrum] (3) /---100---+ | \----- Rsa1.0_00174.1_g00005.1 [Raphanus sativus] (64) | /-100-+ /----- GSBRNA2T00095023001 [Brassica napus] (44) | | /-100+ | | | \----- XP_009107442.1 [Brassica rapa] (52) | \-100+ | | /----- GSBRNA2T00071800001 [Brassica napus] (54) | \-100+ | \----- XP_013603200.1 [Brassica oleracea] (56) /-59-+ | | /----- RrC11149_p1 [Raphanus raphanistrum] (4) | |------100------+ | | \----- Rsa1.0_03305.1_g00002.1 [Raphanus sativus] (48) | | | |--------------------- Thhalv10012033m [Eutrema salsugineum] (50) | | | \--------------------- Tp1g34200 [Thellungiella parvula] (59) /-89-+ | | /----- GSBRNA2T00122982001 [Brassica napus] (8) | | /-100+ | | | \----- XP_009119797.1 [Brassica rapa] (34) | | /-100+ | | | | /----- GSBRNA2T00095130001 [Brassica napus] (42) | | | \-100+ /-97-+ \----100---+ \----- XP_013589911.1 [Brassica oleracea] (63) | | | | | | /----- Rsa1.0_05171.1_g00003.1 [Raphanus sativus] (25) | | \---100---+ | | \----- RrC3106_p1 [Raphanus raphanistrum] (58) | | | \------------------------------- 676708560 [Sisymbrium irio] (7) | | /----- 473862 [Arabidopsis lyrata] (6) | /-85-+ | | \----- Araha.0722s0002.1.p [Arabidopsis halleri] (13) | /-86-+ | | \---------- AT1G46264.1 [Arabidopsis thaliana] (47) | | /-100+ | /----- Csa03g047530.1 [Camelina sativa] (16) | | | | | | | /-100+----- Csa17g071540.1 [Camelina sativa] (22) | | | | | | |---------100--------+ | \----- Csa14g050890.1 [Camelina sativa] (66) | | |-100+ | | | | /----- Cagra.1735s0008.1.p [Capsella grandiflora] (45) | | | \-100+ | | | \----- Carubv10009522m [Capsella rubella] (61) /-99-+ | | | | | \--------------- Bostr.12302s0136.1.p [Boechera stricta] (36) | | | | | | /----- KFK44645.1 [Arabis alpina] (33) | | \--------------57--------------+ | | \----- AA625G00003 [Aethionema arabicum] (37) /-100-+ | | | | /----- Bostr.3148s0205.1.p [Boechera stricta] (12) | | \----------------100----------------+ | | \----- AA3G00228 [Aethionema arabicum] (41) | | | | /----- XP_010541155.1 [Tarenaya hassleriana] (27) | \-------------------90-------------------+ | \----- XP_010530513.1 [Tarenaya hassleriana] (29) | | /----- Gh_A09G1035 [Gossypium hirsutum] (10) | /-78-+ | | \----- Cotton_A_01784_BGI-A2_v1.0 [Gossypium arboreum] (65) /-51-+ /-61-+ | | | \---------- Gh_D09G1056 [Gossypium hirsutum] (24) | | /-100-+ | | | \--------------- Gorai.006G125000.1 [Gossypium raimondii] (23) | | /-100+ | | | \--------------------- Thecc1EG040889t1 [Theobroma cacao] (49) | | | | | | /----- Eucgr.J00680.1.p [Eucalyptus grandis] (17) | | /-68-+---------100--------+ /-51-+ | | | \----- EcS752808.10 [Eucalyptus camaldulensis] (53) | | | | | | | | | | /----- Neem_6438_f_1 [Azadirachta indica] (30) | | \---------100--------+ \---------100--------+ | | | \----- Neem_19563_f_1 [Azadirachta indica] (60) | | | --97-+ | \------------------------------- XP_010521560.1 [Tarenaya hassleriana] (21) | | | | /----- Eucgr.F02327.1.p [Eucalyptus grandis] (5) | \------------------------100------------------------+ | \----- EcC031945.20 [Eucalyptus camaldulensis] (38) | \-------------------------------------------------------------- Eucgr.F00215.1.p [Eucalyptus grandis] (11) Root part of tree: /------------------------------------------------------------------- Gh_D06G0154 [Gossypium hirsutum] (1) | |------------------------------------------------------------------- Gorai.010G020700.1 [Gossypium raimondii] (35) | | /----------- Gh_A01G1000 [Gossypium hirsutum] (2) | /----100---+ | | \----------- Cotton_A_37093_BGI-A2_v1.0 [Gossypium arboreum] (62) | /----------100---------+ | | | /----------- Gh_D01G1059 [Gossypium hirsutum] (26) | | \----84----+ | | \----------- Gorai.002G135200.1 [Gossypium raimondii] (57) | | | | /--------------------------------- (106) | | | | |-----66----+ /---------------------- Neem_6387_f_5 [Azadirachta indica] (9) | | | | + | \----89----+ /----------- orange1.1g016692m [Citrus sinensis] (15) | | \----100---+ | | \----------- Ciclev10001482m [Citrus clementina] (40) | | | | /----------- Gh_A05G1757 [Gossypium hirsutum] (14) | | /----97----+ | | | \----------- Cotton_A_08661_BGI-A2_v1.0 [Gossypium arboreum] (39) | /----100---+ | | | |----------96----------+---------------------- Gorai.009G213100.1 [Gossypium raimondii] (18) | | | | | | | \---------------------- Gh_D05G1952 [Gossypium hirsutum] (32) | | | | | |--------------------------------------------- Thecc1EG033816t1 [Theobroma cacao] (19) | | | | | | /----------- Gh_D02G0907 [Gossypium hirsutum] (20) | | | /----100---+ \----99----+ | | \----------- Gorai.005G102000.1 [Gossypium raimondii] (46) | |----------100---------+ | | | /----------- Gh_A03G0678 [Gossypium hirsutum] (51) | | \----100---+ | | \----------- Cotton_A_39878_BGI-A2_v1.0 [Gossypium arboreum] (55) | | | \--------------------------------------------- evm.model.supercontig_49.32 [Carica papaya] (43) | | /----------- Gh_A06G0163 [Gossypium hirsutum] (28) \---------------------100--------------------+ \----------- Cotton_A_14899_BGI-A2_v1.0 [Gossypium arboreum] (31) |