PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM4567
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Subtree rooted at node 89: /----- RrC5789_p1 [Raphanus raphanistrum] (2) /---100---+ | \----- Rsa1.0_00642.1_g00025.1 [Raphanus sativus] (14) | /-100-+ /----- XP_009135347.1 [Brassica rapa] (3) | | /-100+ | | | \----- GSBRNA2T00137647001 [Brassica napus] (29) | \-100+ /-97-+ | /----- GSBRNA2T00123666001 [Brassica napus] (18) | | \-100+ | | \----- XP_013626398.1 [Brassica oleracea] (48) | | | \--------------------- 676752760 [Sisymbrium irio] (7) | | /---------- GSBRNA2T00016511001 [Brassica napus] (6) /-91-+ | | | | /----- GSBRNA2T00104741001 [Brassica napus] (30) | | /-100+-74-+ | | | | \----- XP_009146430.1 [Brassica rapa] (41) | | | | | | /-100-+ \---------- XP_013584216.1 [Brassica oleracea] (46) /-50-+ | | | | | \-77-+ \--------------- Rsa1.0_00032.1_g00017.1 [Raphanus sativus] (33) | | | | | \--------------------- Tp3g12200 [Thellungiella parvula] (17) | | | \------------------------------- Thhalv10020873m [Eutrema salsugineum] (8) | /-95-+ /----- XP_009117339.1 [Brassica rapa] (13) | | /-100+ | | | \----- GSBRNA2T00067232001 [Brassica napus] (35) | | /-100+ | | | | /----- GSBRNA2T00155749001 [Brassica napus] (16) | | | \-100+ | \---------100--------+ \----- XP_013588520.1 [Brassica oleracea] (26) | | | | /----- Rsa1.0_00307.1_g00004.1 [Raphanus sativus] (19) | \---100---+ /-89-+ \----- RrC1304_p3 [Raphanus raphanistrum] (44) | | | |----------------------------------------- KFK38750.1 [Arabis alpina] (4) | | | | /--------------------- Bostr.28625s0309.1.p [Boechera stricta] (5) | | | | | | /----- Csa15g018230.1 [Camelina sativa] (11) | | | | | | | /-100+----- Csa01g016410.1 [Camelina sativa] (27) | | | | | | \---------97--------+ | \----- Csa19g020540.1 [Camelina sativa] (31) /--89-+ | /-100+ | | | | | /----- Cagra.0736s0034.1.p [Capsella grandiflora] (23) | | | | \-100+ | | | | \----- Carubv10013860m [Capsella rubella] (47) | | \--54-+ | | | /----- 478803 [Arabidopsis lyrata] (25) | | | /-100+ /-88-+ | | | \----- Araha.4235s0002.1.p [Arabidopsis halleri] (40) | | | \-65-+ | | | \---------- AT3G13960.1 [Arabidopsis thaliana] (36) | | | | | \---------------------------------------------- AA26G00113 [Aethionema arabicum] (50) /-100+ | | | | /----- XP_010534927.1 [Tarenaya hassleriana] (28) | | \----------------------100---------------------+ | | \----- XP_010552235.1 [Tarenaya hassleriana] (43) | | --100+ \--------------------------------------------------------- Eucgr.F04420.1.p [Eucalyptus grandis] (22) | | /-------------------------- evm.model.supercontig_25.118 [Carica papaya] (9) | | | | /----- Ciclev10025855m [Citrus clementina] (10) \----------------100----------------+ /------100------+ | | \----- orange1.1g047108m [Citrus sinensis] (24) | | \-66-+ /--------------- Thecc1EG029130t1 [Theobroma cacao] (37) | | | | /----- Gh_A10G0492 [Gossypium hirsutum] (38) \-100-+ /-100+ | | \----- Cotton_A_08528_BGI-A2_v1.0 [Gossypium arboreum] (49) \-100+ \---------- Gorai.011G058800.1 [Gossypium raimondii] (51) Root part of tree: /------------------------------------------------------------------- Eucgr.C00823.1.p [Eucalyptus grandis] (1) | | /----------- Gorai.009G035200.1 [Gossypium raimondii] (15) | /----100---+ | | \----------- Cotton_A_09326_BGI-A2_v1.0 [Gossypium arboreum] (32) |---------------------100--------------------+ | \---------------------- Thecc1EG037550t2 [Theobroma cacao] (21) | | /--------------------------------- (89) + | | | /----------- Gorai.013G225300.1 [Gossypium raimondii] (12) | /-----69----+ /----99----+ | | | | \----------- Gh_D13G2042 [Gossypium hirsutum] (34) | | \----100---+ | /----55----+ \---------------------- Gh_A13G1692 [Gossypium hirsutum] (45) | | | | | \--------------------------------------------- evm.model.supercontig_28.61 [Carica papaya] (20) \----61----+ | /----------- orange1.1g023105m [Citrus sinensis] (39) \---------------------100--------------------+ \----------- Ciclev10008922m [Citrus clementina] (42) |