PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM4000
Phylogenetic tree for protein ? help Back to Top |
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Subtree rooted at node 101: /-------------------------------------------------------------- KFK44385.1 [Arabis alpina] (2) | | /------------------------------------ 676770562 [Sisymbrium irio] (3) | | | | /---------- Gorai.009G355700.1 [Gossypium raimondii] (6) | | | | | | /----- Gh_A04G1375 [Gossypium hirsutum] (12) | | |-84-+ | | /-54-+ \----- Cotton_A_29346_BGI-A2_v1.0 [Gossypium arboreum] (59) | | | | | | | |---------- Gh_D05G3205 [Gossypium hirsutum] (35) | | /-100-+ | | | | | \---------- Gh_Sca064124G01 [Gossypium hirsutum] (41) | | | | | | /-100+ \--------------- Thecc1EG032408t1 [Theobroma cacao] (49) | | | | | | | \--------------------- Neem_1691_f_1 [Azadirachta indica] (16) | | /-63-+ | | | | /----- Rsa1.0_01575.1_g00007.1 [Raphanus sativus] (29) | | | \---------64---------+ | | | \----- RrC12757_p3 [Raphanus raphanistrum] (30) | |-65-+ | | | /----- GSBRNA2T00052078001 [Brassica napus] (23) | | | /-100+ | | | | \----- XP_009127848.1 [Brassica rapa] (54) | | \---------98---------+ | | | /----- GSBRNA2T00031091001 [Brassica napus] (34) | | \-99-+ | | \----- XP_013618155.1 [Brassica oleracea] (56) | | | | /----- Cagra.0147s0032.1.p [Capsella grandiflora] (7) | | /---100---+ | /-55-+ | \----- Carubv10021118m [Capsella rubella] (57) | | | | | | | /--95-+ /---------- Bostr.10273s0232.1.p [Boechera stricta] (10) | | | | | | | | | | \-84-+ /----- Csa16g032820.1 [Camelina sativa] (32) | | | | | | | | | | \-100+----- Csa09g072460.1 [Camelina sativa] (48) | | | /-95-+ | | | | | | \----- Csa07g038040.1 [Camelina sativa] (58) | | | | | | | | | | /---------- AT1G71130.1 [Arabidopsis thaliana] (24) | | | | | | --90-+ | |----71---+ \----100---+ /----- 476245 [Arabidopsis lyrata] (33) | | | | \-100+ | | | | \----- Araha.4747s0009.1.p [Arabidopsis halleri] (52) | | | | | /-63-+ | \-------------------------- Thhalv10019247m [Eutrema salsugineum] (36) | | | | | | | | /----- GSBRNA2T00092596001 [Brassica napus] (18) | | | | /-92-+ | | | | | \----- XP_013590335.1 [Brassica oleracea] (50) | | | | /-99-+ | | | | | | /----- XP_009104928.1 [Brassica rapa] (25) | | | | | \-100+ | | | |---------81---------+ \----- GSBRNA2T00099623001 [Brassica napus] (27) | /--61-+ | | | | | | | | | /----- Rsa1.0_04164.1_g00003.1 [Raphanus sativus] (40) | | | | | \---100---+ | | | | | \----- RrC6123_p1 [Raphanus raphanistrum] (43) | | | | | | | | | \------------------------------------ KFK41539.1 [Arabis alpina] (37) | /-69-+ | | | | | | \----------------------------------------- Tp5g26300 [Thellungiella parvula] (44) | | | | | | | \---------------------------------------------- AA31G00055 [Aethionema arabicum] (20) | | | |-69-+ | /----- XP_010557856.1 [Tarenaya hassleriana] (4) | | \----------------------100---------------------+ | | \----- XP_010547342.1 [Tarenaya hassleriana] (14) | | | \--------------------------------------------------------- AA39G00494 [Aethionema arabicum] (22) | | /---------- XP_013596384.1 [Brassica oleracea] (8) | | | | /----- GSBRNA2T00007782001 [Brassica napus] (11) | /-100+-100+ | | | \----- XP_009103209.1 [Brassica rapa] (53) | | | | | \---------- GSBRNA2T00061818001 [Brassica napus] (21) | | | /--53-+--------------- Thhalv10008928m [Eutrema salsugineum] (19) | | | | | |--------------- 676730070 [Sisymbrium irio] (46) | | | | | \--------------- Tp1g20440 [Thellungiella parvula] (51) \-------------------66-------------------+ | /----- Rsa1.0_00596.1_g00016.1 [Raphanus sativus] (9) | /---100---+ | | \----- RrC16317_p1 [Raphanus raphanistrum] (38) | | \-100-+ /----- GSBRNA2T00153173001 [Brassica napus] (13) | /-100+ | | \----- XP_013602704.1 [Brassica oleracea] (42) \-97-+ | /----- GSBRNA2T00073071001 [Brassica napus] (17) \-82-+ \----- XP_009110125.1 [Brassica rapa] (45) Root part of tree: /------------------------------------------------------------------- Bostr.12659s0155.1.p [Boechera stricta] (1) | | /----------------- Cagra.0114s0006.1.p [Capsella grandiflora] (15) | /---------------100--------------+ | | \----------------- Carubv10010423m [Capsella rubella] (31) | | |-------100------+ /--------------------------------- Csa14g029210.1 [Camelina sativa] (26) | | | + \-------100------+ /----------------- Csa17g030040.1 [Camelina sativa] (28) | \-------99------+ | \----------------- Csa03g026820.1 [Camelina sativa] (55) | | /-------------------------------------------------- (101) | | | | /----------------- Araha.5836s0002.1.p [Arabidopsis halleri] (5) \-------99-------+ /------100------+ | | \----------------- 472549 [Arabidopsis lyrata] (47) \-------100------+ \--------------------------------- AT1G22985.1 [Arabidopsis thaliana] (39) |