PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Phylogenetic Tree for OGEM4000
Phylogenetic tree for protein ? help Back to Top

      Subtree rooted at node 101:

           /-------------------------------------------------------------- KFK44385.1 [Arabis alpina]                         (2)
           |                                                                          
           |                         /------------------------------------ 676770562 [Sisymbrium irio]                        (3)
           |                         |                                                
           |                         |                         /---------- Gorai.009G355700.1 [Gossypium raimondii]           (6)
           |                         |                         |                      
           |                         |                         |    /----- Gh_A04G1375 [Gossypium hirsutum]                   (12)
           |                         |                         |-84-+                 
           |                         |                    /-54-+    \----- Cotton_A_29346_BGI-A2_v1.0 [Gossypium arboreum]    (59)
           |                         |                    |    |                      
           |                         |                    |    |---------- Gh_D05G3205 [Gossypium hirsutum]                   (35)
           |                         |              /-100-+    |                      
           |                         |              |     |    \---------- Gh_Sca064124G01 [Gossypium hirsutum]               (41)
           |                         |              |     |                           
           |                         |         /-100+     \--------------- Thecc1EG032408t1 [Theobroma cacao]                 (49)
           |                         |         |    |                                 
           |                         |         |    \--------------------- Neem_1691_f_1 [Azadirachta indica]                 (16)
           |                         |    /-63-+                                      
           |                         |    |    |                    /----- Rsa1.0_01575.1_g00007.1 [Raphanus sativus]         (29)
           |                         |    |    \---------64---------+                 
           |                         |    |                         \----- RrC12757_p3 [Raphanus raphanistrum]                (30)
           |                         |-65-+                                           
           |                         |    |                         /----- GSBRNA2T00052078001 [Brassica napus]               (23)
           |                         |    |                    /-100+                 
           |                         |    |                    |    \----- XP_009127848.1 [Brassica rapa]                     (54)
           |                         |    \---------98---------+                      
           |                         |                         |    /----- GSBRNA2T00031091001 [Brassica napus]               (34)
           |                         |                         \-99-+                 
           |                         |                              \----- XP_013618155.1 [Brassica oleracea]                 (56)
           |                         |                                                
           |                         |                              /----- Cagra.0147s0032.1.p [Capsella grandiflora]         (7)
           |                         |                    /---100---+                 
           |                    /-55-+                    |         \----- Carubv10021118m [Capsella rubella]                 (57)
           |                    |    |                    |                           
           |                    |    |              /--95-+    /---------- Bostr.10273s0232.1.p [Boechera stricta]            (10)
           |                    |    |              |     |    |                      
           |                    |    |              |     \-84-+    /----- Csa16g032820.1 [Camelina sativa]                   (32)
           |                    |    |              |          |    |                 
           |                    |    |              |          \-100+----- Csa09g072460.1 [Camelina sativa]                   (48)
           |                    |    |         /-95-+               |                 
           |                    |    |         |    |               \----- Csa07g038040.1 [Camelina sativa]                   (58)
           |                    |    |         |    |                                 
           |                    |    |         |    |          /---------- AT1G71130.1 [Arabidopsis thaliana]                 (24)
           |                    |    |         |    |          |                      
      --90-+                    |    |----71---+    \----100---+    /----- 476245 [Arabidopsis lyrata]                        (33)
           |                    |    |         |               \-100+                 
           |                    |    |         |                    \----- Araha.4747s0009.1.p [Arabidopsis halleri]          (52)
           |                    |    |         |                                      
           |               /-63-+    |         \-------------------------- Thhalv10019247m [Eutrema salsugineum]              (36)
           |               |    |    |                                                
           |               |    |    |                              /----- GSBRNA2T00092596001 [Brassica napus]               (18)
           |               |    |    |                         /-92-+                 
           |               |    |    |                         |    \----- XP_013590335.1 [Brassica oleracea]                 (50)
           |               |    |    |                    /-99-+                      
           |               |    |    |                    |    |    /----- XP_009104928.1 [Brassica rapa]                     (25)
           |               |    |    |                    |    \-100+                 
           |               |    |    |---------81---------+         \----- GSBRNA2T00099623001 [Brassica napus]               (27)
           |         /--61-+    |    |                    |                           
           |         |     |    |    |                    |         /----- Rsa1.0_04164.1_g00003.1 [Raphanus sativus]         (40)
           |         |     |    |    |                    \---100---+                 
           |         |     |    |    |                              \----- RrC6123_p1 [Raphanus raphanistrum]                 (43)
           |         |     |    |    |                                                
           |         |     |    |    \------------------------------------ KFK41539.1 [Arabis alpina]                         (37)
           |    /-69-+     |    |                                                     
           |    |    |     |    \----------------------------------------- Tp5g26300 [Thellungiella parvula]                  (44)
           |    |    |     |                                                          
           |    |    |     \---------------------------------------------- AA31G00055 [Aethionema arabicum]                   (20)
           |    |    |                                                                
           |-69-+    |                                              /----- XP_010557856.1 [Tarenaya hassleriana]              (4)
           |    |    \----------------------100---------------------+                 
           |    |                                                   \----- XP_010547342.1 [Tarenaya hassleriana]              (14)
           |    |                                                                     
           |    \--------------------------------------------------------- AA39G00494 [Aethionema arabicum]                   (22)
           |                                                                          
           |                                                   /---------- XP_013596384.1 [Brassica oleracea]                 (8)
           |                                                   |                      
           |                                                   |    /----- GSBRNA2T00007782001 [Brassica napus]               (11)
           |                                              /-100+-100+                 
           |                                              |    |    \----- XP_009103209.1 [Brassica rapa]                     (53)
           |                                              |    |                      
           |                                              |    \---------- GSBRNA2T00061818001 [Brassica napus]               (21)
           |                                              |                           
           |                                        /--53-+--------------- Thhalv10008928m [Eutrema salsugineum]              (19)
           |                                        |     |                           
           |                                        |     |--------------- 676730070 [Sisymbrium irio]                        (46)
           |                                        |     |                           
           |                                        |     \--------------- Tp1g20440 [Thellungiella parvula]                  (51)
           \-------------------66-------------------+                                 
                                                    |               /----- Rsa1.0_00596.1_g00016.1 [Raphanus sativus]         (9)
                                                    |     /---100---+                 
                                                    |     |         \----- RrC16317_p1 [Raphanus raphanistrum]                (38)
                                                    |     |                           
                                                    \-100-+         /----- GSBRNA2T00153173001 [Brassica napus]               (13)
                                                          |    /-100+                 
                                                          |    |    \----- XP_013602704.1 [Brassica oleracea]                 (42)
                                                          \-97-+                      
                                                               |    /----- GSBRNA2T00073071001 [Brassica napus]               (17)
                                                               \-82-+                 
                                                                    \----- XP_009110125.1 [Brassica rapa]                     (45)
                                                                                      
      Root part of tree:

      /------------------------------------------------------------------- Bostr.12659s0155.1.p [Boechera stricta]            (1)
      |                                                                               
      |                                                 /----------------- Cagra.0114s0006.1.p [Capsella grandiflora]         (15)
      |                /---------------100--------------+                             
      |                |                                \----------------- Carubv10010423m [Capsella rubella]                 (31)
      |                |                                                              
      |-------100------+                /--------------------------------- Csa14g029210.1 [Camelina sativa]                   (26)
      |                |                |                                             
      +                \-------100------+               /----------------- Csa17g030040.1 [Camelina sativa]                   (28)
      |                                 \-------99------+                             
      |                                                 \----------------- Csa03g026820.1 [Camelina sativa]                   (55)
      |                                                                               
      |                /-------------------------------------------------- (101)
      |                |                                                              
      |                |                                /----------------- Araha.5836s0002.1.p [Arabidopsis halleri]          (5)
      \-------99-------+                /------100------+                             
                       |                |               \----------------- 472549 [Arabidopsis lyrata]                        (47)
                       \-------100------+                                             
                                        \--------------------------------- AT1G22985.1 [Arabidopsis thaliana]                 (39)