PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM2892
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Subtree rooted at node 111: /----- Csa14g016530.1 [Camelina sativa] (2) | /---100---+----- Csa17g018900.1 [Camelina sativa] (58) | | | \----- Csa03g017350.1 [Camelina sativa] (60) | | /----- Carubv10011839m [Capsella rubella] (15) |---100---+ | \----- Cagra.3501s0144.1.p [Capsella grandiflora] (66) /--------------------96-------------------+ | | /----- Araha.6740s0012.1.p [Arabidopsis halleri] (17) | | /-91-+ | | | \----- 888726 [Arabidopsis lyrata] (59) | |-100+ | | \---------- AT1G13600.1 [Arabidopsis thaliana] (42) | | | \--------------- Bostr.13671s0096.1.p [Boechera stricta] (52) | | /---------- XP_009114126.1 [Brassica rapa] (3) | | | /-100+ /----- GSBRNA2T00053811001 [Brassica napus] (5) | | | | | | \-100+----- GSBRNA2T00117854001 [Brassica napus] (12) | /---------96---------+ | | | | \----- XP_013610371.1 [Brassica oleracea] (69) | | | | | \--------------- Rsa1.0_00038.1_g00019.1 [Raphanus sativus] (53) | | | | /------------------------------- KFK39850.1 [Arabis alpina] (9) | | | | | | /----- Cagra.4609s0004.1.p [Capsella grandiflora] (10) | | | /-84-+ | | | | \----- Carubv10018947m [Capsella rubella] (27) | | | | | | | /-90-+ /----- Csa09g007460.1 [Camelina sativa] (28) | | | | | | | |-80-+ | \-100+----- Csa04g009620.1 [Camelina sativa] (39) | | | /--63-+ | | | | | | \----- Csa06g004980.1 [Camelina sativa] (57) | | | | | | | | /-63-+ \--------------- AT2G04038.1 [Arabidopsis thaliana] (46) | | | | | | | | | | /----- 484308 [Arabidopsis lyrata] (36) | | \-100+ \-------99------+ | | | \----- Araha.0644s0001.1.p [Arabidopsis halleri] (55) | | | | | \-------------------------- Bostr.0556s0218.1.p [Boechera stricta] (68) | | | /-100+ /----- RrC17569_p1 [Raphanus raphanistrum] (14) | | | /---100---+ /-74-+ | | | \----- Rsa1.0_01459.1_g00003.1 [Raphanus sativus] (31) | | | | | | | | | /-100-+ /----- XP_013596246.1 [Brassica oleracea] (33) | | | | | | /-100+ | | | | | | | \----- GSBRNA2T00017079001 [Brassica napus] (37) | | | | | \-100+ | | | | /-59-+ | /----- XP_009152133.1 [Brassica rapa] (47) | | | | | | \-100+ | | | | | | \----- GSBRNA2T00088744001 [Brassica napus] (50) | | | |----51---+ | | | | | | \--------------------- 676757736 [Sisymbrium irio] (51) | | | | | | | | | \-------------------------- Thhalv10005000m [Eutrema salsugineum] (19) | | /-99-+ | | | | | | /----- Rsa1.0_04124.1_g00004.1 [Raphanus sativus] (24) | | | | | /---100---+ | | | | | | \----- RrC23935_p1 [Raphanus raphanistrum] (40) | | | | | | | | | | | /-100-+ /----- GSBRNA2T00108447001 [Brassica napus] (29) | | | | | | | /-100+ | | | | | | | | \----- XP_013613647.1 [Brassica oleracea] (41) | | | | | | \-100+ | | | | \------57------+ | /----- XP_009129054.1 [Brassica rapa] (34) | | | | | \-100+ | | | | | \----- GSBRNA2T00084097001 [Brassica napus] (62) | | | | | | | | | \--------------------- Tp2g14790 [Thellungiella parvula] (30) --94-+ | | | | | | \----------------------------------------- AA53G00793 [Aethionema arabicum] (32) | | | | | /-100-+ /----- Gorai.005G148600.1 [Gossypium raimondii] (4) | | | | | | | | | /-100+----- Gh_A03G0941 [Gossypium hirsutum] (44) | | | | | | | | | | /-100+ \----- Gh_D02G1324 [Gossypium hirsutum] (63) | | | | | | | | | | | \---------- Thecc1EG011390t1 [Theobroma cacao] (48) | | | | | | | | | /-100-+ /----- orange1.1g043159m [Citrus sinensis] (8) | | | | | | /-100+ | | | | | | | \----- Ciclev10032777m [Citrus clementina] (26) | \-100+ | | \-100+ | | | | | /----- Neem_22402_f_2 [Azadirachta indica] (22) | | | /-66-+ \-100+ | | | | | \----- Neem_4647_f_4 [Azadirachta indica] (65) | | | | | | | | | |--------------------- XP_010528016.1 [Tarenaya hassleriana] (18) | | \--------100--------+ | | | | \--------------------- XP_010554251.1 [Tarenaya hassleriana] (49) | | | | | \-------------------------- XP_010523524.1 [Tarenaya hassleriana] (35) | | | \---------------------------------------------------- AA65G00368 [Aethionema arabicum] (23) | \-------------------------------------------------------------- KFK43613.1 [Arabis alpina] (20) Root part of tree: /------------------------------------------------------------------- Rsa1.0_00455.1_g00016.1 [Raphanus sativus] (1) | |------------------------------------------------------------------- RrC1751_p1 [Raphanus raphanistrum] (56) | | /------- (111) | /---------------------82---------------------+ | | \------- Thhalv10008825m [Eutrema salsugineum] (6) | | | | /------- XP_009148651.1 [Brassica rapa] (11) | | | | | /--100--+------- GSBRNA2T00064182001 [Brassica napus] (38) + | | | | | /--99--+ \------- GSBRNA2T00105493001 [Brassica napus] (64) | | | | | /--100--+ /--100--+ \--------------- XP_013584811.1 [Brassica oleracea] (61) | | | | | | | | | \---------------------- GSBRNA2T00081807001 [Brassica napus] (45) | | | /--100-+ | | | | | /------- RrC3031_p4 [Raphanus raphanistrum] (25) | | | | \----------100---------+ | | | /--100--+ \------- Rsa1.0_00018.1_g00010.1 [Raphanus sativus] (54) | | | | | \--100-+ \--97--+ \------------------------------------- 676755410 [Sisymbrium irio] (21) | | | \--------------------------------------------- Tp1g11980 [Thellungiella parvula] (13) | | /------- XP_009117984.1 [Brassica rapa] (7) | /---99--+ | | \------- XP_009117985.1 [Brassica rapa] (67) | | \---------------------100--------------------+--------------- XP_013603176.1 [Brassica oleracea] (16) | \--------------- GSBRNA2T00090513001 [Brassica napus] (43) |