PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_013596246.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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Family | bZIP | ||||||||
Protein Properties | Length: 170aa MW: 19887.2 Da PI: 7.5714 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 38.2 | 3.2e-12 | 87 | 135 | 5 | 53 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelk 53 +++rr+ +NRe+ArrsR RK+ ++eL v L +eN L+++l++ XP_013596246.1 87 RKQRRMLSNRESARRSRMRKQRHLDELWSQVIRLRNENNCLIDKLNSVL 135 79****************************************9999765 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 3.2E-13 | 83 | 147 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.53 | 85 | 148 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 4.01E-12 | 87 | 136 | No hit | No description |
Pfam | PF00170 | 2.2E-10 | 87 | 144 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 2.5E-10 | 87 | 135 | No hit | No description |
CDD | cd14702 | 3.67E-17 | 88 | 136 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 90 | 105 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 170 aa Download sequence Send to blast |
MIPAEITGYF QYLSQENLTM IPAEFNVINM PSSPTSSSSL NYLNDLINNN NYSSSSNGQD 60 LMLSNNSTSD EDHHYNHRQS IIILDERKQR RMLSNRESAR RSRMRKQRHL DELWSQVIRL 120 RNENNCLIDK LNSVLETQDN VLKENSKLKE EASDLRRLVC DLKSNKYNSF |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 99 | 106 | RRSRMRKQ |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_013596246.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_013596246.1 | 1e-120 | PREDICTED: basic leucine zipper 43-like | ||||
Refseq | XP_013640250.1 | 1e-120 | basic leucine zipper 43-like | ||||
TrEMBL | A0A078JVE1 | 1e-119 | A0A078JVE1_BRANA; BnaCnng73390D protein | ||||
TrEMBL | A0A0D3DAR7 | 1e-119 | A0A0D3DAR7_BRAOL; Uncharacterized protein | ||||
TrEMBL | A0A3P6EYG0 | 1e-119 | A0A3P6EYG0_BRAOL; Uncharacterized protein | ||||
STRING | Bo7g081750.1 | 1e-120 | (Brassica oleracea) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM2892 | 24 | 69 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G04038.1 | 4e-66 | basic leucine-zipper 48 |