PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | KFK43613.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Arabideae; Arabis
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Family | bZIP | ||||||||
Protein Properties | Length: 194aa MW: 22678.7 Da PI: 5.3596 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 39.9 | 9.1e-13 | 84 | 134 | 5 | 55 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkke 55 +++rr+++NRe+ArrsR RK+ ++eL v L + N+ L ++l++ ++ KFK43613.1 84 RKQRRMISNRESARRSRMRKQRHLDELWSQVIRLRTDNHCLVDKLNRVSES 134 79*******************************************998875 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 1.4E-13 | 80 | 144 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.151 | 82 | 134 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 4.0E-11 | 82 | 133 | No hit | No description |
Pfam | PF00170 | 8.2E-11 | 84 | 134 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 6.98E-12 | 84 | 133 | No hit | No description |
CDD | cd14702 | 3.68E-17 | 85 | 135 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 87 | 102 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0042803 | Molecular Function | protein homodimerization activity | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding | ||||
GO:0046982 | Molecular Function | protein heterodimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 194 aa Download sequence Send to blast |
MNTIPAEFTG YFQYNNQTPI MESEHFNMPS SPTSSSSFYY LNGLINNNNN NNNYSSSSNG 60 QDLMTSNNST SDEDHQQSMI IDERKQRRMI SNRESARRSR MRKQRHLDEL WSQVIRLRTD 120 NHCLVDKLNR VSESHELALK ENAKLKEETS DLRQLISEIK SNNEDDNNFL RELEDSISIS 180 RSDSNQRGRD FELC |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 96 | 103 | RRSRMRKQ |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | KFK43613.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AC027134 | 0.0 | AC027134.4 Arabidopsis thaliana chromosome I BAC F13B4 genomic sequence, complete sequence. | |||
GenBank | AF332430 | 0.0 | AF332430.1 Arabidopsis thaliana clone C00105 (e) putative bZIP transcription factor (At1g13600) mRNA, complete cds. | |||
GenBank | CP002684 | 0.0 | CP002684.1 Arabidopsis thaliana chromosome 1 sequence. | |||
GenBank | F21F23 | 0.0 | AC027656.4 Sequence of BAC F21F23 from Arabidopsis thaliana chromosome 1, complete sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | NP_172817.2 | 1e-115 | basic leucine-zipper 58 | ||||
TrEMBL | A0A087HNB1 | 1e-138 | A0A087HNB1_ARAAL; Uncharacterized protein | ||||
STRING | A0A087HNB1 | 1e-139 | (Arabis alpina) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM2892 | 24 | 69 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G13600.1 | 1e-111 | basic leucine-zipper 58 |