PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Phylogenetic Tree for OGEM1435
Phylogenetic tree for protein ? help Back to Top |
---|
Subtree rooted at node 165: /----- Gh_D05G3474 [Gossypium hirsutum] (5) /-100+ | \----- Gorai.009G433200.1 [Gossypium raimondii] (55) /-100+ | | /----- Cotton_A_13669_BGI-A2_v1.0 [Gossypium arboreum] (38) | \-100+ /--98-+ \----- Gh_A04G1303 [Gossypium hirsutum] (40) | | | \--------------- Thecc1EG031364t2 [Theobroma cacao] (33) | /-86-+ /----- Gh_D01G0514 [Gossypium hirsutum] (44) | | /-98-+ | | | \----- Gorai.002G073700.1 [Gossypium raimondii] (82) | \----100---+ | | /----- Cotton_A_06324_BGI-A2_v1.0 [Gossypium arboreum] (50) | \-99-+ | \----- Gh_A01G2064 [Gossypium hirsutum] (83) | /-97-+ /----- orange1.1g019011m [Citrus sinensis] (14) | | /-100+ | | | \----- Ciclev10008812m [Citrus clementina] (24) | |------100------+ | | | /----- Neem_5630_f_1 [Azadirachta indica] (25) /---------100--------+ | \-100+ | | | \----- Neem_34950_f_1 [Azadirachta indica] (47) | | | | | \-------------------------- Eucgr.F01093.1.p [Eucalyptus grandis] (45) | | | \------------------------------- evm.model.supercontig_80.93 [Carica papaya] (70) | | /----- 492058 [Arabidopsis lyrata] (6) | /----------------100----------------+ | | \----- AT4G27410.3 [Arabidopsis thaliana] (18) | | | | /----- Csa11g016750.1 [Camelina sativa] (10) | | /-55-+ | | | \----- Csa10g015440.1 [Camelina sativa] (74) | |--------------55--------------+ | | \---------- Csa12g023460.1 [Camelina sativa] (34) | | | | /----- GSBRNA2T00154660001 [Brassica napus] (15) | | /-100+ | | | \----- XP_013598751.1 [Brassica oleracea] (22) | | /-87-+ | | | | /----- GSBRNA2T00044271001 [Brassica napus] (54) | | | \-99-+ | | /----100---+ \----- XP_009137656.1 [Brassica rapa] (90) /-100+ | | | | | | | | /----- Rsa1.0_02349.1_g00008.1 [Raphanus sativus] (51) | | | | \---100---+ | | | | \----- RrC235_p8 [Raphanus raphanistrum] (53) | | | | | | | | /----- XP_013617682.1 [Brassica oleracea] (17) | | | | /-100+ | | | /-75-+ | \----- GSBRNA2T00042260001 [Brassica napus] (86) | | | | | /-100+ | | /-100+ | | | | /----- XP_009143398.1 [Brassica rapa] (19) | | | | | | | \-100+ | | | | | | /-100-+ \----- GSBRNA2T00149455001 [Brassica napus] (81) | | | | | | | | | | | | /-94-+ | | | /----- RrC18618_p1 [Raphanus raphanistrum] (61) | | | | | | \-99-+ \---100---+ | | | | | | | \----- Rsa1.0_00121.1_g00044.1 [Raphanus sativus] (68) | | | | | | | | | | |-66-+ | \--------------------- 676743298 [Sisymbrium irio] (94) | | | | | | | | | | | \------------------------------- Tp7g25350 [Thellungiella parvula] (43) /-100+ | | | | | | | | | \------------------------------------ Thhalv10025818m [Eutrema salsugineum] (69) | | | | | | | \-100-+ | /----- AA11G00017 [Aethionema arabicum] (26) | | | |-----------------53----------------+ | | | | \----- AA32G01100 [Aethionema arabicum] (37) | | | | | | | | /----- Carubv10005353m [Capsella rubella] (36) | | | |----------------100----------------+ | | | | \----- Cagra.0570s0027.1.p [Capsella grandiflora] (62) | | | | | | | |----------------------------------------- Bostr.7867s0562.1.p [Boechera stricta] (48) | | | | | | | \----------------------------------------- KFK29255.1 [Arabis alpina] (95) | | | | | | /----- XP_010539252.1 [Tarenaya hassleriana] (7) | | \-------------------100------------------+ | | \----- XP_010520901.1 [Tarenaya hassleriana] (80) | | | | /----- XP_010535116.1 [Tarenaya hassleriana] (16) | \------------------------100------------------------+ | \----- XP_010545806.1 [Tarenaya hassleriana] (79) | | /----- XP_009135445.1 [Brassica rapa] (8) | /-100+ | | \----- GSBRNA2T00137565001 [Brassica napus] (28) | /------100------+ | | | /----- GSBRNA2T00123793001 [Brassica napus] (30) | | \-100+ | | \----- XP_013626600.1 [Brassica oleracea] (66) | | | | /----- GSBRNA2T00106217001 [Brassica napus] (11) | | /-93-+ | /-52-+ | \----- XP_013638893.1 [Brassica oleracea] (57) | | | /-100+ | | | | | /----- XP_009146239.1 [Brassica rapa] (73) | | | | \-100+ --100+ | | /-100-+ \----- GSBRNA2T00104909001 [Brassica napus] (75) | | | | | | | | | | /----- Rsa1.0_02275.1_g00001.1 [Raphanus sativus] (35) | | \-100+ \---100---+ | | | \----- RrC11514_p1 [Raphanus raphanistrum] (92) | /-99-+ | | | | \--------------------- 676784714 [Sisymbrium irio] (71) | | | | | | /----- Rsa1.0_00749.1_g00001.1 [Raphanus sativus] (23) | | | /---100---+ | | | | \----- RrC7430_p1 [Raphanus raphanistrum] (42) | | | | | | | | /----- GSBRNA2T00018140001 [Brassica napus] (32) | /-91-+ \------100------+ /-100+ | | | | | \----- XP_013584205.1 [Brassica oleracea] (77) | | | | | | | | \-100+---------- GSBRNA2T00009965001 [Brassica napus] (41) | | | | | | | \---------- XP_009115498.1 [Brassica rapa] (58) | | | | | \------------------------------------ Tp3g13750 [Thellungiella parvula] (85) | | | | /----- Csa15g020040.1 [Camelina sativa] (9) | | /-97-+ | | | \----- Csa19g022270.1 [Camelina sativa] (89) | | /-100+ | | | \---------- Csa01g018090.1 [Camelina sativa] (76) | /-100+ /-100-+ | | | | | /----- Cagra.0007s0097.1.p [Capsella grandiflora] (52) | | | | \---100---+ | | | | \----- Carubv10014211m [Capsella rubella] (65) | | | | | | | | /---------- AT3G15500.1 [Arabidopsis thaliana] (27) | | | /-100+ | | | | | |----87----+ /----- 478996 [Arabidopsis lyrata] (72) | | | | | \-100+ \------100------+ | | | \----- Araha.34090s0001.1.p [Arabidopsis halleri] (87) | | /-94-+ | | | | | \--------------------- Bostr.28625s0149.1.p [Boechera stricta] (93) | | | | | \----56---+ \-------------------------- KFK38892.1 [Arabis alpina] (12) | | | \------------------------------- Thhalv10021174m [Eutrema salsugineum] (29) | \---------------------------------------------- AA26G00262 [Aethionema arabicum] (56) Root part of tree: /------------------------------------------------------------------- Tp_un0602_001 [Thellungiella parvula] (1) | |------------------------------------------------------------------- Tp_un0674_001 [Thellungiella parvula] (63) | | /------- GSBRNA2T00033572001 [Brassica napus] (2) | | | |------- GSBRNA2T00033573001 [Brassica napus] (13) | /---98--+ | | |------- XP_013588383.1 [Brassica oleracea] (39) | | | | /--99--+ \------- XP_009147649.1 [Brassica rapa] (59) + | | | | | /------- Rsa1.0_00135.1_g00028.1 [Raphanus sativus] (4) | /---99--+ \--100--+ | | | \------- RrC4514_p2 [Raphanus raphanistrum] (49) | | | | /--------------61-------------+ \---------------------- 676735874 [Sisymbrium irio] (31) | | | | | \------------------------------ Thhalv10011676m [Eutrema salsugineum] (46) | | | | /---------------------------------------------------- KFK35760.1 [Arabis alpina] (3) \--100-+ | | | /--------------------------------------------- (165) | | | | | | /------- Csa03g060000.1 [Camelina sativa] (20) \---98--+ | /---55--+ | | | \------- Csa17g093080.1 [Camelina sativa] (21) | | /--100-+ | | | \--------------- Csa14g063210.1 [Camelina sativa] (84) \--95--+ /--100--+ | | | /------- Cagra.0946s0025.1.p [Capsella grandiflora] (64) | | \------100-----+ | /--100-+ \------- Carubv10009816m [Capsella rubella] (91) | | | | | \------------------------------ Bostr.0124s0082.1.p [Boechera stricta] (60) | | \---88--+ /------- 474413 [Arabidopsis lyrata] (67) | /---99--+ | | \------- Araha.27238s0003.1.p [Arabidopsis halleri] (88) \----------89---------+ \--------------- AT1G52890.1 [Arabidopsis thaliana] (78) |