PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM5900
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Subtree rooted at node 80: /---------- AT1G68920.1 [Arabidopsis thaliana] (2) | /----------------------60----------------------+ /----- 476021 [Arabidopsis lyrata] (12) | \-95-+ | \----- Araha.22315s0001.1.p [Arabidopsis halleri] (18) | |--------------------------------------------------------- Csa16g028750.1 [Camelina sativa] (3) | | /----- Gh_A03G0937 [Gossypium hirsutum] (4) | /-100+ | | \----- Cotton_A_37193_BGI-A2_v1.0 [Gossypium arboreum] (5) | /----100---+ | | | /----- Gh_D02G1321 [Gossypium hirsutum] (6) | | \-100+ | | \----- Gorai.005G148300.3 [Gossypium raimondii] (9) | | | /-100+ /----- Gorai.013G098600.1 [Gossypium raimondii] (11) | | | /-100+ | | | | \----- Gh_D13G0902 [Gossypium hirsutum] (39) | | | /-100+ | | | | \---------- Cotton_A_33827_BGI-A2_v1.0 [Gossypium arboreum] (35) | /-99-+ \--99-+ | | | \--------------- Thecc1EG011413t1 [Theobroma cacao] (32) | | | | | | /----- orange1.1g008631m [Citrus sinensis] (23) | /-100+ \---------100--------+ | | | \----- Ciclev10031122m [Citrus clementina] (28) | | | | /-100+ \------------------------------- evm.model.supercontig_1.175 [Carica papaya] (29) | | | /-53-+ | \------------------------------------ Eucgr.B03106.1.p [Eucalyptus grandis] (42) | | | | | | /----- XP_010552795.1 [Tarenaya hassleriana] (7) | | | /-58-+ | | | | \----- XP_010542232.1 [Tarenaya hassleriana] (17) | | /-100+ /-55-+ | | | | | \---------- XP_010552542.1 [Tarenaya hassleriana] (21) | | | | /-100-+ | | | | | | /----- XP_010552794.1 [Tarenaya hassleriana] (38) | | | | | \----80---+ | | | | | \----- XP_010552544.1 [Tarenaya hassleriana] (41) | | /-100-+ \--------100--------+ | | | | |--------------------- XP_010551346.1 [Tarenaya hassleriana] (19) | | | | | | | | | \--------------------- XP_010532461.1 [Tarenaya hassleriana] (44) | | | | | | | \---------------------------------------------- AA112G00015 [Aethionema arabicum] (14) | | | | | | /----- Rsa1.0_10134.1_g00001.1 [Raphanus sativus] (8) | | | /---100---+ | | | | \----- RrC10676_p1 [Raphanus raphanistrum] (25) | | | | | | | /----100---+ /----- GSBRNA2T00082777001 [Brassica napus] (20) | | | | | /-100+ --53-+ | | | | | \----- XP_009127689.1 [Brassica rapa] (22) | | | | \-100+ | | | | | /----- GSBRNA2T00135296001 [Brassica napus] (26) | \-99-+ | \-100+ | | | \----- XP_013614310.1 [Brassica oleracea] (36) | | | | | | /----- GSBRNA2T00054859001 [Brassica napus] (13) | | /-100+ /-100+ | | | | | \----- XP_013587860.1 [Brassica oleracea] (33) | | | | /-100+ | | | | | | /----- GSBRNA2T00101994001 [Brassica napus] (15) | | | | | \-100+ | | | | /-100-+ \----- XP_009105442.1 [Brassica rapa] (40) | | | | | | | | /-100+ | | | /----- RrC784_p8 [Raphanus raphanistrum] (27) | | | | \-61-+ \---100---+ | | | | | \----- Rsa1.0_02506.1_g00007.1 [Raphanus sativus] (30) | | | | | | \------100------+ | \--------------------- 676738810 [Sisymbrium irio] (31) | | | | | \------------------------------- Tp5g24060 [Thellungiella parvula] (43) | | | \------------------------------------ Thhalv10018444m [Eutrema salsugineum] (34) | \-------------------------------------------------------------- Bostr.10273s0474.1.p [Boechera stricta] (10) Root part of tree: /------------------------------------------------------------------- Cagra.1157s0017.1.p [Capsella grandiflora] (1) | |------------------------------------------------------------------- Carubv10020178m [Capsella rubella] (37) + | /--------------------------------------------- (80) | | \---------100---------+ /---------------------- Csa07g034410.1 [Camelina sativa] (16) \----------55----------+ \---------------------- Csa05g085590.1 [Camelina sativa] (24) |