PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Phylogenetic Tree for OGEM3642
Phylogenetic tree for protein ? help Back to Top |
---|
Subtree rooted at node 100: /----- GSBRNA2T00022391001 [Brassica napus] (2) | |----- XP_009141971.1 [Brassica rapa] (22) /-91-+ | |----- GSBRNA2T00123248001 [Brassica napus] (34) | | | \----- XP_013633940.1 [Brassica oleracea] (50) /----89----+ | | /----- RrC26490_p1 [Raphanus raphanistrum] (27) | | | | \-100+----- RrC19206_p1 [Raphanus raphanistrum] (37) | | | \----- Rsa1.0_02937.1_g00007.1 [Raphanus sativus] (59) | | /----- Rsa1.0_00029.1_g00026.1 [Raphanus sativus] (4) | /-100+ | | \----- RrC17085_p1 [Raphanus raphanistrum] (47) |----99----+ | | /----- XP_013626524.1 [Brassica oleracea] (35) | \-100+ | \----- GSBRNA2T00019074001 [Brassica napus] (53) | | /----- Rsa1.0_00183.1_g00018.1 [Raphanus sativus] (9) | /---100---+ | | \----- RrC1406_p1 [Raphanus raphanistrum] (26) /-91-+ | | |-100-+ /---------- GSBRNA2T00132819001 [Brassica napus] (20) | | | | | | | | /----- GSBRNA2T00024307001 [Brassica napus] (24) | | \-100+-100+ | | | \----- XP_013634229.1 [Brassica oleracea] (39) | | | | | \---------- XP_009142723.1 [Brassica rapa] (28) | | | | /----- 676756238 [Sisymbrium irio] (25) | |-------80------+ | | \----- Thhalv10017546m [Eutrema salsugineum] (41) | | /-70-+ |--------------------- AA93G00012 [Aethionema arabicum] (49) | | | | | |--------------------- Tp4g23440 [Thellungiella parvula] (61) | | | | | \--------------------- KFK36960.1 [Arabis alpina] (62) | | | | /----- Csa05g011530.1 [Camelina sativa] (10) | |---------77---------+ /-70-+ | \----- Csa04g055550.1 [Camelina sativa] (11) | | | | | |-------------------------- Csa06g046990.1 [Camelina sativa] (14) | | | | | \-------------------------- Bostr.9345s0019.1.p [Boechera stricta] (46) | | /-62-+ | /----- Carubv10023903m [Capsella rubella] (5) | | \------------60-----------+ | | \----- Cagra.1642s0077.1.p [Capsella grandiflora] (42) | | /-93-+ |------------------------------------ 903419 [Arabidopsis lyrata] (15) | | | | | \------------------------------------ Araha.12776s0001.1.p [Arabidopsis halleri] (60) | | | \----------------------------------------- AT2G41130.1 [Arabidopsis thaliana] (33) | | /--------------- Rsa1.0_00422.1_g00016.1 [Raphanus sativus] (7) | | | | /----- GSBRNA2T00126232001 [Brassica napus] (38) | /-100-+ /-100+ | | | | \----- XP_009139074.1 [Brassica rapa] (56) | | \-97-+ | /-92-+ \---------- XP_013637526.1 [Brassica oleracea] (55) | | | | | \--------------------- 676785214 [Sisymbrium irio] (30) | /-100+ | | | /----- Tp5g05800 [Thellungiella parvula] (31) /--76-+ | \---------72---------+ | | /-99-+ \----- Thhalv10006410m [Eutrema salsugineum] (51) | | | | | | | \------------------------------- KFK34915.1 [Arabis alpina] (54) | | | | | | /----- Cagra.0578s0007.1.p [Capsella grandiflora] (18) | | | /---100---+ | | | | \----- Carubv10017947m [Capsella rubella] (23) | | | | | | /-100+ /-100-+ /----- Csa04g043160.1 [Camelina sativa] (40) | | | | | | /-97-+ | | | | | | | \----- Csa09g069180.1 [Camelina sativa] (57) | | | | /-99-+ \-100+ /-99-+ | | | | | \---------- Csa06g031500.1 [Camelina sativa] (48) | | | | | | | | | | | | | \--------------------- Bostr.20505s0075.1.p [Boechera stricta] (21) | | \-98-+ \----99---+ | | | | /----- 486116 [Arabidopsis lyrata] (29) | | | | /-100+ | | | | | \----- Araha.47465s0001.1.p [Arabidopsis halleri] (58) /-100+ | | \------100------+ | | | | \---------- AT3G56770.1 [Arabidopsis thaliana] (44) | | | | | | | \----------------------------------------- AA61G00144 [Aethionema arabicum] (19) | | | --59-+ | \---------------------------------------------------- XP_010542484.1 [Tarenaya hassleriana] (6) | | | \--------------------------------------------------------- XP_010554754.1 [Tarenaya hassleriana] (8) | \-------------------------------------------------------------- Eucgr.A02230.1.p [Eucalyptus grandis] (13) Root part of tree: /------------------------------------------------------------------- Cotton_A_14312_BGI-A2_v1.0 [Gossypium arboreum] (1) | |------------------------------------------------------------------- Gorai.007G352300.1 [Gossypium raimondii] (36) | |------------------------------------------------------------------- Gh_D11G3340 [Gossypium hirsutum] (45) | | /----------- (100) | /---------100---------+ | | \----------- evm.model.supercontig_92.83 [Carica papaya] (52) + | | /-----53----+ /----------- Neem_19431_f_1 [Azadirachta indica] (3) | | | /----100---+ | | | | \----------- Neem_41565_f_1 [Azadirachta indica] (16) | | \----100---+ | /----100---+ | /----------- orange1.1g026479m [Citrus sinensis] (17) | | | \----100---+ | | | \----------- Ciclev10012626m [Citrus clementina] (43) \----97----+ | | \--------------------------------------------- Thecc1EG024016t1 [Theobroma cacao] (12) | \-------------------------------------------------------- Gh_A11G2746 [Gossypium hirsutum] (32) |