PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM2111
Phylogenetic tree for protein ? help Back to Top |
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Subtree rooted at node 129: /----- Carubv10022351m [Capsella rubella] (3) /---100---+ | \----- Cagra.1670s0031.1.p [Capsella grandiflora] (50) | /-100-+ /----- Csa07g064020.1 [Camelina sativa] (19) | | /-99-+ | | | \----- Csa16g055400.1 [Camelina sativa] (77) /-81-+ \-100+ | | \---------- Csa09g097350.1 [Camelina sativa] (51) | | | \--------------------- Bostr.22157s0066.1.p [Boechera stricta] (20) /-100+ | | /---------- AT1G62700.1 [Arabidopsis thaliana] (39) | | | | \------100------+ /----- Araha.9431s0002.1.p [Arabidopsis halleri] (65) | \-100+ | \----- 475082 [Arabidopsis lyrata] (67) | | /----- RrC19_p1 [Raphanus raphanistrum] (16) | /---100---+ /--------------100-------------+ | \----- Rsa1.0_02032.1_g00004.1 [Raphanus sativus] (17) | | | | | | /----- GSBRNA2T00050536001 [Brassica napus] (22) | | /-100-+ /-100+ | | | | | \----- XP_013609845.1 [Brassica oleracea] (33) | | | | | | | | \-100+---------- GSBRNA2T00086386001 [Brassica napus] (24) | | | | | \----99---+ \---------- XP_009113056.1 [Brassica rapa] (35) | | | | /----- Tp2g01960 [Thellungiella parvula] (25) | | /-99-+ | | | \----- 676732362 [Sisymbrium irio] (64) | \----96----+ | \---------- Thhalv10023502m [Eutrema salsugineum] (34) | | /---------- XP_010546359.1 [Tarenaya hassleriana] (4) | | | /----------------------100---------------------+ /----- XP_010533763.1 [Tarenaya hassleriana] (13) | | \-75-+ | | \----- XP_010553468.1 [Tarenaya hassleriana] (21) | | --100+ | /----- Gh_A12G1990 [Gossypium hirsutum] (5) | | /-100+ | | | \----- Cotton_A_07124_BGI-A2_v1.0 [Gossypium arboreum] (28) | | /-100+ | | | | /----- Gh_D12G2169 [Gossypium hirsutum] (40) | | | \-53-+ | | /--99-+ \----- Gorai.008G236400.1 [Gossypium raimondii] (74) | | | | | | | \--------------- Thecc1EG016035t2 [Theobroma cacao] (59) | | | | | /---------88--------+ /----- Gorai.004G201100.1 [Gossypium raimondii] (9) | | | | /-100+ | | | | | \----- Gh_D08G1858 [Gossypium hirsutum] (38) | | | \----100---+ | | | | /----- Cotton_A_18426_BGI-A2_v1.0 [Gossypium arboreum] (42) | | | \-93-+ | | | \----- Gh_A08G1552 [Gossypium hirsutum] (43) | | | | | | /------------------------------- Eucgr.D02027.1.p [Eucalyptus grandis] (23) | | | | | | | | /----- Ciclev10006988m [Citrus clementina] (45) \-100+ | | /-100+ | /-85-+ | | \----- orange1.1g018596m [Citrus sinensis] (53) | | | | /----100---+ | | | | | \---------- Neem_5527_f_1 [Azadirachta indica] (54) | | | /-100+ | | | | | | /-100+ /--------------- Thecc1EG014939t1 [Theobroma cacao] (46) | | | | | | | | | | | | | | | | /----- Gh_A07G0349 [Gossypium hirsutum] (55) | | | | | | \-100-+ /-98-+ | | | | | | | | \----- Cotton_A_03573_BGI-A2_v1.0 [Gossypium arboreum] (63) | | | | | | \-100+ | | | | \-100+ | /----- Gorai.001G048200.1 [Gossypium raimondii] (56) | | | | | \-89-+ | | \-84-+ | \----- Gh_D07G0411 [Gossypium hirsutum] (75) | | | | | | | | /----- evm.model.supercontig_3.311 [Carica papaya] (47) | /-100-+ | \---------100--------+ | | | | \----- Eucgr.A02887.1.p [Eucalyptus grandis] (66) | | | | | | | | /----- orange1.1g020354m [Citrus sinensis] (48) | | | | /-100+ | | | | | \----- Ciclev10024218m [Citrus clementina] (76) | | | \-----------100-----------+ | | | \---------- Neem_8133_f_4 [Azadirachta indica] (72) | | | \-100+ | /----- Gorai.003G169000.1 [Gossypium raimondii] (32) | | /-65-+ | | | \----- Gh_D03G1542 [Gossypium hirsutum] (44) | | /-96-+ | | | \---------- Gh_A03G1986 [Gossypium hirsutum] (36) | \--------------100-------------+ | \--------------- Cotton_A_17125_BGI-A2_v1.0 [Gossypium arboreum] (73) | \---------------------------------------------------- evm.model.supercontig_29.118 [Carica papaya] (58) Root part of tree: /------------------------------------------------------------------- Csa17g016480.1 [Camelina sativa] (1) | |------------------------------------------------------------------- Csa14g015200.1 [Camelina sativa] (49) | | /------------- XP_009110661.1 [Brassica rapa] (2) | | | /--93--+ /------- XP_013602769.1 [Brassica oleracea] (26) | | \--92-+ | /--100-+ \------- GSBRNA2T00047395001 [Brassica napus] (78) | | | | | \-------------------- GSBRNA2T00015204001 [Brassica napus] (41) | /-100-+ | | | /------- RrC17699_p1 [Raphanus raphanistrum] (27) | | \--------100--------+ | | \------- Rsa1.0_00020.1_g00053.1 [Raphanus sativus] (71) | | | | /------- (129) | | /--------100--------+ | | | \------- AA65G00271 [Aethionema arabicum] (18) | | | | | | /------- RrC1107_p4 [Raphanus raphanistrum] (12) | | | /-----100----+ | | | | \------- Rsa1.0_01629.1_g00002.1 [Raphanus sativus] (31) | | | | | |--95-+--100-+ /------- GSBRNA2T00090371001 [Brassica napus] (29) | /--100-+ | | /-100-+ | | | | | | \------- GSBRNA2T00105458001 [Brassica napus] (30) + | | | \--100-+ | | | | \------------- GSBRNA2T00035413001 [Brassica napus] (69) | | | | | | | \--------------------------- Tp1g10880 [Thellungiella parvula] (15) | | | | | |--------------------------------- 676755314 [Sisymbrium irio] (6) | | | | | | /------- GSBRNA2T00044605001 [Brassica napus] (14) | /--100-+ | /--93-+ | | | | | \------- XP_013584293.1 [Brassica oleracea] (60) | | | | /--100-+ | | | | | \------------- XP_009148605.1 [Brassica rapa] (57) | | | \-----100----+ | | | | /------- RrC1065_p2 [Raphanus raphanistrum] (37) | | | \-----100----+ | /--97--+ | \------- Rsa1.0_00018.1_g00047.1 [Raphanus sativus] (61) | | | | | | | \---------------------------------------- Thhalv10007823m [Eutrema salsugineum] (62) | | | | | | /------- Araha.0650s0016.1.p [Arabidopsis halleri] (8) | | | /--61-+ | | | | \------- 471376 [Arabidopsis lyrata] (11) | /-100-+ \---------------100---------------+ | | | \------------- AT1G12260.1 [Arabidopsis thaliana] (70) | | | | | | /------- Carubv10009366m [Capsella rubella] (10) | | |----------------------100---------------------+ \--100-+ | \------- Cagra.0568s0135.1.p [Capsella grandiflora] (68) | | | \------------------------------------------------------ Bostr.13671s0233.1.p [Boechera stricta] (52) | \------------------------------------------------------------ Csa03g016020.1 [Camelina sativa] (7) |