PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM2976
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Subtree rooted at node 118: /----- orange1.1g018192m [Citrus sinensis] (2) /---------100--------+ | \----- Ciclev10025936m [Citrus clementina] (53) | | /--------------------- Thecc1EG001212t1 [Theobroma cacao] (8) /-84-+ | | | | /----- Gh_D11G2225 [Gossypium hirsutum] (16) | | | /-100+ | \-100+ | \----- Gorai.007G243200.1 [Gossypium raimondii] (46) | | /-100+ | | | \---------- Cotton_A_04502_BGI-A2_v1.0 [Gossypium arboreum] (30) | \--99-+ /-97-+ | /----- Cotton_A_15951_BGI-A2_v1.0 [Gossypium arboreum] (23) | | \---100---+ | | \----- Gorai.008G102300.1 [Gossypium raimondii] (41) | | | | /----- EcS527675.10 [Eucalyptus camaldulensis] (24) /-100+ | /-99-+ | | | | \----- Neem_34837_f_1 [Azadirachta indica] (44) | | \---------76---------+ | | \---------- Eucgr.H04824.1.p [Eucalyptus grandis] (57) /-98-+ | | | \------------------------------------ evm.model.supercontig_100.3 [Carica papaya] (12) | | | | /----- XP_010546397.1 [Tarenaya hassleriana] (7) | \----------------100----------------+ | \----- XP_010519853.1 [Tarenaya hassleriana] (51) | | /---------- Csa20g015290.1 [Camelina sativa] (4) | | | /-100+ /----- Csa13g011780.1 [Camelina sativa] (47) | | \-99-+ | | \----- Csa08g054570.1 [Camelina sativa] (63) | /-100-+ | | | /----- Cagra.1085s0054.1.p [Capsella grandiflora] (9) | | \---100---+ | /-100+ \----- Carubv10001361m [Capsella rubella] (49) | | | | | \--------------------- Bostr.13175s0098.1.p [Boechera stricta] (54) | /-54-+ | | | /----- Araha.14007s0009.1.p [Arabidopsis halleri] (20) | | \---------92---------+ | /-88-+ \----- 487829 [Arabidopsis lyrata] (21) | | | /-100-+ | \------------------------------- AT5G10030.1 [Arabidopsis thaliana] (55) | | | | | | /--------------------- 676757432 [Sisymbrium irio] (5) | | | | | | | | /----- GSBRNA2T00016097001 [Brassica napus] (6) | | | | /-100+ | | | /-100+ | \----- XP_013606928.1 [Brassica oleracea] (34) | | | | | /-100+ | | | | | | | /----- XP_009122096.1 [Brassica rapa] (14) | | | | | | \-89-+ | | | | \-100-+ \----- GSBRNA2T00135931001 [Brassica napus] (52) | | /-100+ | | | | | | | | /----- RrC7750_p2 [Raphanus raphanistrum] (22) | | | | | \---100---+ | | | | | \----- Rsa1.0_01411.1_g00007.1 [Raphanus sativus] (43) | | | | | | | | | /-100+ /----- XP_009125331.1 [Brassica rapa] (11) /-100+ | | | | | /-99-+ | | | | | | | | \----- GSBRNA2T00143541001 [Brassica napus] (28) | | | | | | | /-100+ | | | | | | | | | /----- XP_013613665.1 [Brassica oleracea] (33) | | | | | | | | \-100+ | | \-100+ | | | /-100-+ \----- GSBRNA2T00068983001 [Brassica napus] (35) | | | \-100+ | | | | | | | | | | /----- Rsa1.0_03315.1_g00001.1 [Raphanus sativus] (42) | | | | \-100+ \---100---+ | | | | | \----- RrC3509_p2 [Raphanus raphanistrum] (60) | | | | | /-100+ | | | \--------------------- Tp6g33370 [Thellungiella parvula] (29) | | | | | | | | | \------------------------------- Thhalv10013890m [Eutrema salsugineum] (36) | | | | | | | \----------------------------------------- AA44G00265 [Aethionema arabicum] (27) | | | | | \---------------------------------------------------- AA4G00251 [Aethionema arabicum] (58) | | | | /---------- Araha.6556s0007.1.p [Arabidopsis halleri] (25) | | | --62-+ \----------------------99----------------------+ /----- AT5G65210.1 [Arabidopsis thaliana] (32) | \-96-+ | \----- 886806 [Arabidopsis lyrata] (45) | | /---------- Csa18g038960.1 [Camelina sativa] (18) | | | /-100+ /----- Csa11g102430.1 [Camelina sativa] (38) | | \-100+ | | \----- Csa02g073440.1 [Camelina sativa] (65) \----------------------100---------------------+ | /----- Cagra.0917s0063.1.p [Capsella grandiflora] (19) \---100---+ \----- Carubv10026623m [Capsella rubella] (26) Root part of tree: /------------------------------------------------------------------- Tp2g28310 [Thellungiella parvula] (1) | | /--------------------------------- GSBRNA2T00055814001 [Brassica napus] (13) | | | | /----------- XP_009130499.1 [Brassica rapa] (37) | /----100----+ /----100---+ | | | | \----------- GSBRNA2T00064753001 [Brassica napus] (40) | | \----91----+ |---------100---------+ \---------------------- XP_013613617.1 [Brassica oleracea] (48) | | | \--------------------------------------------- Rsa1.0_00073.1_g00017.1 [Raphanus sativus] (39) | | /----------- GSBRNA2T00134784001 [Brassica napus] (3) | | | /----93----+----------- XP_009112173.1 [Brassica rapa] (10) + | | |---------------------100--------------------+ \----------- XP_013607232.1 [Brassica oleracea] (56) | | | \---------------------- RrC993_p1 [Raphanus raphanistrum] (50) | | /----------- (118) | /----100---+ | | \----------- Bostr.0568s0268.1.p [Boechera stricta] (17) | /---------------100---------------+ | | \---------------------- Thhalv10004432m [Eutrema salsugineum] (64) | | | | /----------- XP_013621864.1 [Brassica oleracea] (15) | | /----99----+ | | | \----------- GSBRNA2T00079287001 [Brassica napus] (31) \----99----+ /----97----+ | | \---------------------- Rsa1.0_05739.1_g00004.1 [Raphanus sativus] (61) | /----100----+ | | | /----------- GSBRNA2T00000768001 [Brassica napus] (59) | | \---------100---------+ \----100---+ \----------- XP_009150603.1 [Brassica rapa] (66) | \--------------------------------------------- 676752332 [Sisymbrium irio] (62) |