PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM1893
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Subtree rooted at node 131: /----- RrC3383_p2 [Raphanus raphanistrum] (2) /---100---+ | \----- Rsa1.0_00016.1_g00082.1 [Raphanus sativus] (58) | /-100-+ /----- XP_013609958.1 [Brassica oleracea] (28) | | /-99-+ | | | \----- GSBRNA2T00104046001 [Brassica napus] (68) | \-100+ | | /----- XP_009122008.1 [Brassica rapa] (63) /-100+ \-100+ | | \----- GSBRNA2T00135844001 [Brassica napus] (64) | | | |--------------------- Tp6g32520 [Thellungiella parvula] (32) /-87-+ | | | \--------------------- 676781796 [Sisymbrium irio] (45) | | | \-------------------------- Thhalv10015251m [Eutrema salsugineum] (43) | | /----- Csa20g016340.1 [Camelina sativa] (3) | /-95-+ | | \----- Csa13g013710.1 [Camelina sativa] (15) | /-100+ | | \---------- Csa08g002100.1 [Camelina sativa] (61) | /--97-+ | | | /----- Carubv10003340m [Capsella rubella] (20) /------100-----+ | \---100---+ | | /-100+ \----- Cagra.1398s0037.1.p [Capsella grandiflora] (52) | | | | | | | \--------------------- Bostr.13175s0007.1.p [Boechera stricta] (48) | |-100+ | | | /---------- AT5G10970.1 [Arabidopsis thaliana] (26) | | | | | | \------100------+ /----- Araha.36352s0005.1.p [Arabidopsis halleri] (37) | | \-100+ | | \----- 909054 [Arabidopsis lyrata] (39) | | | \------------------------------- KFK25376.1 [Arabis alpina] (17) | | /---------- Rsa1.0_01939.1_g00005.1 [Raphanus sativus] (4) | | | /------100------+ /----- XP_009151040.1 [Brassica rapa] (6) | | \-100+ | | \----- GSBRNA2T00147612001 [Brassica napus] (40) /--87-+ | | | /-79-+ /--------------------- Rsa1.0_00367.1_g00006.1 [Raphanus sativus] (33) | | | | | | | | | | /--------------- Rsa1.0_00051.1_g00016.1 [Raphanus sativus] (38) | | | \-99-+ | | | | | | /----- GSBRNA2T00009571001 [Brassica napus] (55) | | /-96-+ \-100-+ /-100+ | | | | | | \----- XP_009111658.1 [Brassica rapa] (71) | | | | \-100+ | | | | \---------- XP_013610006.1 [Brassica oleracea] (56) | | /-91-+ | | | | | \------------------------------- Tp2g22370 [Thellungiella parvula] (70) | | | | | | | \------------------------------------ KFK27776.1 [Arabis alpina] (65) | | | | | | /----- Csa20g046330.1 [Camelina sativa] (9) | | | /-57-+ /-100+ \-100+ | \----- Csa08g022800.1 [Camelina sativa] (16) | | | /-100+ | | | | \---------- Csa13g031000.1 [Camelina sativa] (10) | | | /--99-+ | | | | \--------------- Bostr.5763s0007.1.p [Boechera stricta] (31) | | | | | | | | /----- Cagra.1945s0011.1.p [Capsella grandiflora] (14) | | \--------100--------+ /---100---+ | | | | \----- Carubv10001837m [Capsella rubella] (22) | | | | /-100+ | \-100-+ /---------- AT5G25160.1 [Arabidopsis thaliana] (27) | | | | | | | | \-100+ /----- 910560 [Arabidopsis lyrata] (34) | | | \-100+ | | | \----- Araha.8220s0005.1.p [Arabidopsis halleri] (57) | | | | | | /----- XP_010541579.1 [Tarenaya hassleriana] (19) | | \----------------------100---------------------+ | | \----- XP_010519603.1 [Tarenaya hassleriana] (49) | | | \--------------------------------------------------------- evm.model.supercontig_127.8 [Carica papaya] (29) | | /---------- Gh_D06G1969 [Gossypium hirsutum] (8) | | | |---------- Gorai.010G222700.1 [Gossypium raimondii] (41) | /-100+ | | | /----- Cotton_A_35683_BGI-A2_v1.0 [Gossypium arboreum] (44) | | \-100+ | | \----- Gh_A06G1920 [Gossypium hirsutum] (53) | /--95-+ | | | /----- Gh_D05G1143 [Gossypium hirsutum] (12) | | | /-100+ --100+ | | | \----- Gorai.009G124600.1 [Gossypium raimondii] (46) | | \-100+ | /-100+ | /----- Gh_A05G1026 [Gossypium hirsutum] (54) | | | \-100+ | | | \----- Cotton_A_17077_BGI-A2_v1.0 [Gossypium arboreum] (66) | | | | /-95-+ \--------------------- Thecc1EG027404t1 [Theobroma cacao] (36) | | | | | | /---------- Neem_4234_f_2 [Azadirachta indica] (11) | | | | | /-53-+ \-------98------+ /----- Ciclev10026234m [Citrus clementina] (47) | | | \-100+ | | | \----- orange1.1g043134m [Citrus sinensis] (60) | | | | /-63-+ \------------------------------- Eucgr.J03101.1.p [Eucalyptus grandis] (35) | | | | | | /----- Eucgr.F03951.1.p [Eucalyptus grandis] (13) | /-100+ \--------------100-------------+ | | | \----- EcC047273.10 [Eucalyptus camaldulensis] (69) | | | | | \----------------------------------------- evm.model.supercontig_10.105 [Carica papaya] (62) \-------66------+ | /---------- Neem_41267_f_1 [Azadirachta indica] (21) | | \----------------100----------------+ /----- Ciclev10010448m [Citrus clementina] (24) \-100+ \----- orange1.1g044109m [Citrus sinensis] (67) Root part of tree: /------------------------------------------------------------------- Thecc1EG036928t1 [Theobroma cacao] (1) | | /----------------- Gorai.010G243700.1 [Gossypium raimondii] (5) | /---------------100--------------+ | | \----------------- Gh_D13G1953 [Gossypium hirsutum] (25) | | |-------84-------+ /----------------- Cotton_A_19201_BGI-A2_v1.0 [Gossypium arboreum] (30) | | /------100------+ | | | \----------------- Gh_A07G0253 [Gossypium hirsutum] (42) + \-------100------+ | | /----------------- Gh_D07G0310 [Gossypium hirsutum] (50) | \------100------+ | \----------------- Gorai.001G036700.1 [Gossypium raimondii] (51) | | /-------------------------------------------------- (131) | | | | /----------------- Gh_A05G0472 [Gossypium hirsutum] (7) \-------67-------+ /-------98------+ | | \----------------- Cotton_A_01186_BGI-A2_v1.0 [Gossypium arboreum] (59) \-------100------+ | /----------------- Gorai.009G060900.1 [Gossypium raimondii] (18) \-------80------+ \----------------- Gh_D05G0586 [Gossypium hirsutum] (23) |