PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM5074
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Subtree rooted at node 90: /----- Cotton_A_29614_BGI-A2_v1.0 [Gossypium arboreum] (2) /-97-+ | \----- Gh_A13G0361 [Gossypium hirsutum] (39) /----100---+ | | /----- Gh_D13G0406 [Gossypium hirsutum] (7) | \-77-+ | \----- Gorai.013G045100.1 [Gossypium raimondii] (21) | /-55-+ /----- Gh_Sca014319G01 [Gossypium hirsutum] (17) | | /-99-+ | | | \----- Gh_A03G1661 [Gossypium hirsutum] (26) | | /-97-+ /-94-+ | | \---------- Cotton_A_21539_BGI-A2_v1.0 [Gossypium arboreum] (30) | | \-100-+ | | \--------------- Gh_D02G2076 [Gossypium hirsutum] (44) | | /---------52---------+ \-------------------------- Thecc1EG007083t1 [Theobroma cacao] (15) | | | | /----- Eucgr.G01493.1.p [Eucalyptus grandis] (13) | \------------99-----------+ | \----- evm.model.supercontig_200.36 [Carica papaya] (22) | | /----- XP_009145108.1 [Brassica rapa] (3) | /-100+ | | \----- GSBRNA2T00042899001 [Brassica napus] (12) | /-100+ | | | /----- GSBRNA2T00094237001 [Brassica napus] (14) | | \-100+ | /------100------+ \----- XP_013584887.1 [Brassica oleracea] (20) | | | | | | /----- RrC15911_p1 [Raphanus raphanistrum] (6) | | \---100---+ | | \----- Rsa1.0_00947.1_g00004.1 [Raphanus sativus] (47) | | | | /--------------------- 676782582 [Sisymbrium irio] (5) | | | | /-93-+ | /----- XP_013591155.1 [Brassica oleracea] (8) | | | | /-100+ | | | /-100+ | \----- GSBRNA2T00012066001 [Brassica napus] (31) | | | | | /-84-+ | | | | | | | /----- GSBRNA2T00098086001 [Brassica napus] (16) | | | | | | \-100+ | | | | \-100-+ \----- XP_009147892.1 [Brassica rapa] (32) | | | | | | | \-100+ | /----- Rsa1.0_05566.1_g00001.1 [Raphanus sativus] (23) | | | \---100---+ /-100+ | | \----- RrC1722_p2 [Raphanus raphanistrum] (41) | | | | | | /-100+ | /----- Thhalv10012185m [Eutrema salsugineum] (37) | | | | \---------100--------+ | | | | \----- Tp1g36660 [Thellungiella parvula] (38) | | | | | | | | /----- AT1G49770.1 [Arabidopsis thaliana] (18) | | | | /---------100--------+ | | | | | \----- 337131 [Arabidopsis lyrata] (48) | | | | | | | | | | /---------- Csa17g085510.1 [Camelina sativa] (19) | | | | | | | | /-100+ | | /-100+ /----- Csa14g055990.1 [Camelina sativa] (35) | | | | \---100---+ | \-100+ | | | | | | \----- Csa03g055650.1 [Camelina sativa] (45) | | | | | /--91-+ | | | | | | | /----- Cagra.2481s0020.1.p [Capsella grandiflora] (28) /-63-+ | | | | | \---100---+ | | |-100-+ | \-100+ \----- Carubv10011964m [Capsella rubella] (49) | | | | | | | | | | | \--------------------- Bostr.26675s0191.1.p [Boechera stricta] (34) | | | | | | | | | \----------------------------------------- AA2G00103 [Aethionema arabicum] (40) | | | | | | | \---------------------------------------------- XP_010529068.1 [Tarenaya hassleriana] (10) | | | | | | /----- Ciclev10030106m [Citrus clementina] (33) | | | /-100+ --100+ | | | \----- orange1.1g037241m [Citrus sinensis] (46) | | \-------------------100-------------------+ | | | /----- Neem_6619_f_3 [Azadirachta indica] (36) | | \-100+ | | \----- Neem_26629_f_1 [Azadirachta indica] (42) | | | \--------------------------------------------------------- evm.model.supercontig_21.177 [Carica papaya] (29) | | /----- orange1.1g038084m [Citrus sinensis] (4) | /-100+ | | \----- Ciclev10003973m [Citrus clementina] (11) \------------------------100------------------------+ \---------- Neem_7365_f_3 [Azadirachta indica] (9) Root part of tree: /------------------------------------------------------------------- Gh_Sca008688G01 [Gossypium hirsutum] (1) | |------------------------------------------------------------------- Cotton_A_40087_BGI-A2_v1.0 [Gossypium arboreum] (24) | + /---------------------- (90) | /----------100---------+ | | \---------------------- Thecc1EG033803t1 [Theobroma cacao] (43) \---------100---------+ | /---------------------- Gh_D01G1057 [Gossypium hirsutum] (25) \----------100---------+ \---------------------- Gorai.002G135000.1 [Gossypium raimondii] (27) |