PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM4634
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Subtree rooted at node 85: /----- Csa17g069280.1 [Camelina sativa] (2) /-100+ | \----- Csa03g048570.1 [Camelina sativa] (11) /-100+ | | /----- Carubv10009864m [Capsella rubella] (10) | \-100+ /-100-+ \----- Cagra.2795s0001.1.p [Capsella grandiflora] (24) | | | \--------------- Bostr.12302s0013.1.p [Boechera stricta] (17) | /---100---+ /----- AT1G42990.1 [Arabidopsis thaliana] (27) | | /-88-+ | | | \----- 473749 [Arabidopsis lyrata] (28) | \----100---+ | \---------- Araha.54950s0002.1.p [Arabidopsis halleri] (40) | /-100+ /-------------------------- Thhalv10004635m [Eutrema salsugineum] (12) | | | | | | /----- GSBRNA2T00059301001 [Brassica napus] (15) | | | /-100+ | | | | \----- GSBRNA2T00134033001 [Brassica napus] (43) | | | | | \-100+ /-97-+---------- XP_009107646.1 [Brassica rapa] (46) | | | | | | | \---------- XP_013599877.1 [Brassica oleracea] (47) /-100+ | /-100-+ | | | | | /----- RrC24348_p1 [Raphanus raphanistrum] (20) | | | | \---100---+ | | \-99-+ \----- Rsa1.0_03303.1_g00004.1 [Raphanus sativus] (33) | | | | | | /----- Tp1g32200 [Thellungiella parvula] (25) /-100+ | \-------76------+ | | | \----- 676756418 [Sisymbrium irio] (29) | | | | | \------------------------------------ KFK27095.1 [Arabis alpina] (13) /-100-+ | | | \----------------------------------------- AA71G00021 [Aethionema arabicum] (41) | | | \---------------------------------------------- XP_010539032.1 [Tarenaya hassleriana] (31) | | /----- EcC053802.10 [Eucalyptus camaldulensis] (4) | /-95-+ | | \----- Eucgr.G02751.1.p [Eucalyptus grandis] (9) | /-97-+ | | \---------- Eucgr.F02193.1.p [Eucalyptus grandis] (37) | | | /--99-+ /---------- Eucgr.F01824.1.p [Eucalyptus grandis] (21) | | | | | | \-95-+ /----- Eucgr.L02193.1.p [Eucalyptus grandis] (23) | | \-100+ /-100+--------------99--------------+ \----- EcC058338.10 [Eucalyptus camaldulensis] (35) | | | | | | /----- EcC039152.10 [Eucalyptus camaldulensis] (16) | | \------100------+ | | \----- Eucgr.F03612.1.p [Eucalyptus grandis] (32) | | | | /----- orange1.1g022379m [Citrus sinensis] (5) | | /-100+ | | | \----- Ciclev10002004m [Citrus clementina] (19) | |-------------------100-------------------+ | | | /----- Neem_4442_f_6 [Azadirachta indica] (44) /-100+ | \-100+ | | | \----- Neem_28170_f_1 [Azadirachta indica] (48) | | | | | | /----- evm.TU.contig_24967.6 [Carica papaya] (18) | | \----------------------100---------------------+ | | \----- evm.model.supercontig_438.4 [Carica papaya] (42) | | | | /--------------- Thecc1EG034804t1 [Theobroma cacao] (14) | | | --100+ | | /----- Gh_D04G0051 [Gossypium hirsutum] (36) | \-------------------100-------------------+ /-100+ | | | \----- Gorai.012G007100.1 [Gossypium raimondii] (38) | \-100+ | \---------- Cotton_A_06085_BGI-A2_v1.0 [Gossypium arboreum] (45) | | /----- Cotton_A_29174_BGI-A2_v1.0 [Gossypium arboreum] (3) | /-81-+ | | \----- Gh_A05G2508 [Gossypium hirsutum] (8) \-------------------------62------------------------+ | /----- Gh_D05G2786 [Gossypium hirsutum] (22) \-98-+ \----- Gorai.009G309200.1 [Gossypium raimondii] (30) Root part of tree: /------------------------------------------------------------------- Gh_D08G0879 [Gossypium hirsutum] (1) | |------------------------------------------------------------------- Gorai.004G097700.1 [Gossypium raimondii] (6) | | /--------------------------- (85) + | | /-----91-----+ /------------- Gh_A04G0770 [Gossypium hirsutum] (7) | | \-----100-----+ | /------53-----+ \------------- Gh_A04G0769 [Gossypium hirsutum] (34) | | | \-----78-----+ \---------------------------------------- Cotton_A_05107_BGI-A2_v1.0 [Gossypium arboreum] (39) | \------------------------------------------------------ Gorai.006G220700.1 [Gossypium raimondii] (26) |