PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Gorai.004G097700.1 | ||||||||
Common Name | B456_004G097700 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Family | bZIP | ||||||||
Protein Properties | Length: 155aa MW: 17894 Da PI: 4.5021 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 33.6 | 8.3e-11 | 107 | 149 | 4 | 46 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLk 46 k+++r +NR A rsR+RKk++++ Le k+ Le+e ++L Gorai.004G097700.1 107 AKKQKRQLRNRDAVVRSRERKKMYVKDLEMKSRYLEGECRRLS 149 59************************************98886 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 6.0E-10 | 102 | 149 | No hit | No description |
PROSITE profile | PS50217 | 9.071 | 106 | 148 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 2.1E-9 | 107 | 149 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 5.88E-9 | 108 | 151 | No hit | No description |
CDD | cd14704 | 3.20E-13 | 109 | 154 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 155 aa Download sequence Send to blast |
MEEINWDTFF LEVDLLDFGD ILDNEPEQVT KPPPQPCSTQ NPDEEPTLSS WIEEIEKVLI 60 EDDNFDHMVE TQLSPPCSGS DIVGVDSGDL HKQSQTHTDV DKDNPIAKKQ KRQLRNRDAV 120 VRSRERKKMY VKDLEMKSRY LEGECRRLSH VLHC* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_017606263.1 | 9e-85 | PREDICTED: bZIP transcription factor 60-like | ||||
TrEMBL | A0A0D2MW25 | 1e-110 | A0A0D2MW25_GOSRA; Uncharacterized protein | ||||
STRING | Gorai.004G097700.1 | 1e-111 | (Gossypium raimondii) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM4634 | 28 | 48 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G42990.1 | 2e-09 | basic region/leucine zipper motif 60 |
Link Out ? help Back to Top | |
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Phytozome | Gorai.004G097700.1 |
Publications ? help Back to Top | |||
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