PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cotton_A_05107_BGI-A2_v1.0 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Family | bZIP | ||||||||
Protein Properties | Length: 56aa MW: 6789.94 Da PI: 10.9435 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 24 | 8.3e-08 | 1 | 36 | 12 | 47 |
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 12 kNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkk 47 +N+ A rsR+RKk++++ L+ k+ Le++ ++L Cotton_A_05107_BGI-A2_v1.0 1 RNKNATMRSRERKKMYVKDLKMKSRYLEGKCRRLSH 36 8****************************9998876 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF57959 | 4.75E-8 | 1 | 49 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 5.9E-8 | 1 | 49 | No hit | No description |
Sequence ? help Back to Top |
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Protein Sequence Length: 56 aa Download sequence Send to blast |
RNKNATMRSR ERKKMYVKDL KMKSRYLEGK CRRLSHDFQC FIAENQALQI FFSSSL |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor involved in endoplasmic reticulum (ER) stress response (PubMed:21223397, PubMed:22050533, PubMed:22199238). Acts downstream of the ER stress sensors IRE1, BZIP39 and BZIP60 to activate BiP chaperone genes (PubMed:22050533, PubMed:22199238). {ECO:0000269|PubMed:21223397, ECO:0000269|PubMed:22050533, ECO:0000269|PubMed:22199238}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: By dithiothreitol-induced endoplasmic reticulum (ER) stress response (PubMed:22050533, PubMed:21223397). Induced by salt stress (PubMed:22050533). {ECO:0000269|PubMed:21223397, ECO:0000269|PubMed:22050533}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012468773.1 | 1e-22 | PREDICTED: uncharacterized protein LOC105786840 | ||||
Swissprot | Q69XV0 | 1e-15 | BZP50_ORYSJ; bZIP transcription factor 50 | ||||
TrEMBL | A0A2P5QM41 | 8e-24 | A0A2P5QM41_GOSBA; Uncharacterized protein | ||||
STRING | Gorai.006G220700.1 | 2e-24 | (Gossypium raimondii) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM4634 | 28 | 48 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G42990.1 | 7e-13 | basic region/leucine zipper motif 60 |
Publications ? help Back to Top | |||
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