PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM5213
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Subtree rooted at node 79: /----- Ciclev10024588m [Citrus clementina] (3) /-100+ | \----- orange1.1g042376m [Citrus sinensis] (14) /-100+ | | /----- Neem_1368_f_4 [Azadirachta indica] (25) | \-100+ /----87----+ \----- Neem_24960_f_1 [Azadirachta indica] (48) | | | \--------------- Eucgr.F04097.1.p [Eucalyptus grandis] (33) | /--------100--------+ /--------------------- Thecc1EG036034t1 [Theobroma cacao] (6) | | | | | | /---------- Gh_A08G2042 [Gossypium hirsutum] (7) | \-90-+ | | | /-100+ /----- Gorai.004G267300.1 [Gossypium raimondii] (8) | | | \-56-+ | \-100-+ \----- Gh_D08G2434 [Gossypium hirsutum] (11) | | | \--------------- Cotton_A_05832_BGI-A2_v1.0 [Gossypium arboreum] (20) | | /---------- RrC4110_p2 [Raphanus raphanistrum] (4) | | | /-100+ /----- XP_013612508.1 [Brassica oleracea] (24) | | \-100+ | /--79-+ \----- XP_009113605.1 [Brassica rapa] (37) | | | | /-77-+ \--------------- Thhalv10029403m [Eutrema salsugineum] (30) | | | | | \--------------------- Tp6g07070 [Thellungiella parvula] (31) | | | | /----- GSBRNA2T00151449001 [Brassica napus] (12) | | /-100+ | | | \----- XP_009134191.1 [Brassica rapa] (39) /--52-+ | /-100+ | | /-99-+ | | /----- XP_013627811.1 [Brassica oleracea] (21) | | | | | \-100+ | | | |----100---+ \----- GSBRNA2T00119863001 [Brassica napus] (42) | | | | | | | | | | /----- RrC8287_p2 [Raphanus raphanistrum] (13) | | /-61-+ | \---100---+ | | | | | \----- Rsa1.0_06690.1_g00001.1 [Raphanus sativus] (28) | | | | | | | | | \-------------------------- 676791226 [Sisymbrium irio] (34) | | | | | | | \------------------------------- KFK31989.1 [Arabis alpina] (23) | | | | | | /----- Csa13g047490.1 [Camelina sativa] (9) | | | | | | /-100+ /-100+----- Csa08g040330.1 [Camelina sativa] (10) | | | | | | /-96-+ | | | | \----- Csa02g026430.1 [Camelina sativa] (35) | | | | | /-100+ | | | | | | | /----- Cagra.12686s0005.1.p [Capsella grandiflora] (15) | | | | | | \-100+ | | | | | /-100-+ \----- Carubv10003879m [Capsella rubella] (36) | | | | | | | | | \-100+ | | \--------------- Bostr.25463s0283.1.p [Boechera stricta] (44) | | | \------100-----+ | | | | /----- AT4G10350.1 [Arabidopsis thaliana] (26) /-100+ | | | | | | | | \-------95------+----- Araha.20405s0001.1.p [Arabidopsis halleri] (40) | | | | | | | | | \----- 863655 [Arabidopsis lyrata] (41) | | | | | | | \----------------------------------------- AA3G00107 [Aethionema arabicum] (45) --100+ | | | | \---------------------------------------------------- XP_010542367.1 [Tarenaya hassleriana] (22) | | | \--------------------------------------------------------- XP_010538892.1 [Tarenaya hassleriana] (46) | \-------------------------------------------------------------- AA54G00190 [Aethionema arabicum] (18) Root part of tree: /------------------------------------------------------------------- Carubv10010920m [Capsella rubella] (1) | |------------------------------------------------------------------- Cagra.6133s0030.1.p [Capsella grandiflora] (19) | | /------------------------------------------------------ Csa14g043230.1 [Camelina sativa] (2) | | | | /------------- (79) + | /------80-----+ | | | \------------- KFK45065.1 [Arabis alpina] (32) | | /-----100----+ | | | | /------------- 676766542 [Sisymbrium irio] (29) | | | \------74-----+ | |------68-----+ \------------- Thhalv10008226m [Eutrema salsugineum] (38) | | | \-----100----+ \---------------------------------------- Bostr.3359s0042.1.p [Boechera stricta] (27) | |------------------------------------------------------ Csa17g055620.1 [Camelina sativa] (5) | | /------------- Araha.8824s0002.1.p [Arabidopsis halleri] (16) | /------53-----+ | | \------------- 473504 [Arabidopsis lyrata] (47) |------------60------------+ | \--------------------------- AT1G33280.1 [Arabidopsis thaliana] (43) | \------------------------------------------------------ Csa03g037530.1 [Camelina sativa] (17) |