PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for
Trifolium pratense
C3H FamilyPhylogenetic tree for domain ? help Back to Top |
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/------------------------------------------------------------------- Tp57577_TGAC_v2_mRNA38592/199-219 (1) | |------------------------------------------------------------------- Tp57577_TGAC_v2_mRNA35829/253-274 (12) | | /----------- Tp57577_TGAC_v2_mRNA32204/303-323 (2) | /----98----+ | | \----------- Tp57577_TGAC_v2_mRNA12622/309-329 (44) | /----95----+ | | \---------------------- Tp57577_TGAC_v2_mRNA1902/273-293 (77) | | | |--------------------------------- Tp57577_TGAC_v2_mRNA15682/178-198 (36) | | | /----------68----------+--------------------------------- Tp57577_TGAC_v2_mRNA39745/261-281 (46) | | | | | |--------------------------------- Tp57577_TGAC_v2_mRNA35750/270-290 (74) | | | | | \--------------------------------- Tp57577_TGAC_v2_mRNA11769/37-59 (92) | | | | /--------------------------------------------- Tp57577_TGAC_v2_mRNA26501/320-343 (3) | | | | | | /----------- Tp57577_TGAC_v2_mRNA15108/348-371 (43) | | | /----85----+ | | | | \----------- Tp57577_TGAC_v2_mRNA41450/36-59 (88) | | | /----75----+ | |----86----+ | \---------------------- Tp57577_TGAC_v2_mRNA36721/355-378 (82) | | |-----50----+ | | | \--------------------------------- Tp57577_TGAC_v2_mRNA38790/508-533 (70) | | | | | | /----------- Tp57577_TGAC_v2_mRNA31372/326-352 (57) | | \----------------95---------------+ | | \----------- Tp57577_TGAC_v2_mRNA15137/265-291 (62) | | | |-------------------------------------------------------- Tp57577_TGAC_v2_mRNA31163/317-341 (4) | | | | /----------- Tp57577_TGAC_v2_mRNA20997/192-217 (5) | |---------------------100--------------------+ | | \----------- Tp57577_TGAC_v2_mRNA30656/160-185 (41) | | | | /----------- Tp57577_TGAC_v2_mRNA3425/92-116 (6) | |---------------------62---------------------+ | | \----------- Tp57577_TGAC_v2_mRNA38522/10-34 (30) | | | |-------------------------------------------------------- Tp57577_TGAC_v2_mRNA5022/273-298 (7) | | | | /----------- Tp57577_TGAC_v2_mRNA35100/55-79 (8) | | | | | /----52----+----------- Tp57577_TGAC_v2_mRNA15108/45-70 (28) | | | | | | /----63----+ \----------- Tp57577_TGAC_v2_mRNA36721/51-73 (32) | | | | + | | \---------------------- Tp57577_TGAC_v2_mRNA26501/48-73 (51) | |----------51----------+ | | | /----------- Tp57577_TGAC_v2_mRNA31372/32-58 (16) | | \----------93---------+ | | \----------- Tp57577_TGAC_v2_mRNA15137/34-60 (60) | | | | /----------- Tp57577_TGAC_v2_mRNA17081/338-356 (9) | | | | |---------------------78---------------------+----------- Tp57577_TGAC_v2_mRNA11046/481-503 (18) | | | | | \----------- Tp57577_TGAC_v2_mRNA35944/120-142 (81) | | | |-------------------------------------------------------- Tp57577_TGAC_v2_mRNA2146/366-393 (10) | | | | /----------- Tp57577_TGAC_v2_mRNA38592/264-284 (11) | | /----66----+ | | | \----------- Tp57577_TGAC_v2_mRNA35829/318-338 (24) | |----------------55---------------+ | | \---------------------- Tp57577_TGAC_v2_mRNA12537/3-26 (33) | | | | /----------- Tp57577_TGAC_v2_mRNA18846/310-334 (13) | |---------------------98---------------------+ | | \----------- Tp57577_TGAC_v2_mRNA28690/267-290 (21) | | | |-------------------------------------------------------- Tp57577_TGAC_v2_mRNA12679/3-24 (14) | | | | /---------------------- Tp57577_TGAC_v2_mRNA18846/77-101 (15) | | | | | /----96----+ /----------- Tp57577_TGAC_v2_mRNA3425/168-193 (52) | | | \----72----+ | | | \----------- Tp57577_TGAC_v2_mRNA11050/135-159 (94) | |----------77----------+ | | | /----------- Tp57577_TGAC_v2_mRNA18846/142-167 (25) | | \----------93---------+ | | \----------- Tp57577_TGAC_v2_mRNA28690/101-126 (75) | | | |-------------------------------------------------------- Tp57577_TGAC_v2_mRNA38790/236-258 (17) | | | |-------------------------------------------------------- Tp57577_TGAC_v2_mRNA38790/283-306 (19) | | | | /----------- Tp57577_TGAC_v2_mRNA17244/450-469 (20) | |---------------------70---------------------+ | | \----------- Tp57577_TGAC_v2_mRNA38522/43-65 (27) | | | | /----------- Tp57577_TGAC_v2_mRNA12537/34-54 (22) | |---------------------99---------------------+ | | \----------- Tp57577_TGAC_v2_mRNA12679/33-53 (47) | | | | /----------- Tp57577_TGAC_v2_mRNA31163/453-478 (23) \----97----+---------------------55---------------------+ | \----------- Tp57577_TGAC_v2_mRNA35100/346-370 (58) | | /----------- Tp57577_TGAC_v2_mRNA15108/91-115 (26) |---------------------59---------------------+ | \----------- Tp57577_TGAC_v2_mRNA36721/95-119 (89) | | /----------- Tp57577_TGAC_v2_mRNA35829/149-171 (29) |---------------------99---------------------+ | \----------- Tp57577_TGAC_v2_mRNA38592/139-161 (50) | |-------------------------------------------------------- Tp57577_TGAC_v2_mRNA11050/85-110 (31) | |-------------------------------------------------------- Tp57577_TGAC_v2_mRNA9497/114-134 (34) | |-------------------------------------------------------- Tp57577_TGAC_v2_mRNA26501/92-116 (35) | | /----------- Tp57577_TGAC_v2_mRNA2688/72-92 (37) |---------------------99---------------------+ | \----------- Tp57577_TGAC_v2_mRNA2716/58-78 (72) | |-------------------------------------------------------- Tp57577_TGAC_v2_mRNA31372/281-306 (38) | | /----------- Tp57577_TGAC_v2_mRNA23138/14-38 (39) |---------------------96---------------------+ | \----------- Tp57577_TGAC_v2_mRNA2146/217-236 (69) | | /---------------------- Tp57577_TGAC_v2_mRNA15108/137-161 (40) | | | | /----------- Tp57577_TGAC_v2_mRNA31372/125-149 (45) | |----85----+ |----------------51---------------+ \----------- Tp57577_TGAC_v2_mRNA15137/127-151 (93) | | | |---------------------- Tp57577_TGAC_v2_mRNA36721/141-165 (49) | | | \---------------------- Tp57577_TGAC_v2_mRNA35100/145-170 (76) | | /----------- Tp57577_TGAC_v2_mRNA35100/99-124 (42) |---------------------67---------------------+ | \----------- Tp57577_TGAC_v2_mRNA31163/239-264 (87) | |-------------------------------------------------------- Tp57577_TGAC_v2_mRNA23138/144-167 (48) | |-------------------------------------------------------- Tp57577_TGAC_v2_mRNA26320/126-145 (53) | | /----------- Tp57577_TGAC_v2_mRNA6705/66-86 (54) |---------------------74---------------------+ | \----------- Tp57577_TGAC_v2_mRNA32075/73-95 (86) | |-------------------------------------------------------- Tp57577_TGAC_v2_mRNA5022/311-335 (55) | |-------------------------------------------------------- Tp57577_TGAC_v2_mRNA28977/3-23 (56) | |-------------------------------------------------------- Tp57577_TGAC_v2_mRNA26501/275-300 (59) | |-------------------------------------------------------- Tp57577_TGAC_v2_mRNA35100/301-327 (61) | |-------------------------------------------------------- Tp57577_TGAC_v2_mRNA15137/217-243 (63) | |-------------------------------------------------------- Tp57577_TGAC_v2_mRNA26501/139-161 (64) | |-------------------------------------------------------- Tp57577_TGAC_v2_mRNA31163/404-427 (65) | |-------------------------------------------------------- Tp57577_TGAC_v2_mRNA14904/553-572 (66) | |-------------------------------------------------------- Tp57577_TGAC_v2_mRNA38790/461-487 (67) | |-------------------------------------------------------- Tp57577_TGAC_v2_mRNA12537/139-160 (68) | |-------------------------------------------------------- Tp57577_TGAC_v2_mRNA15693/76-101 (71) | |-------------------------------------------------------- Tp57577_TGAC_v2_mRNA38790/326-351 (73) | |-------------------------------------------------------- Tp57577_TGAC_v2_mRNA15137/81-105 (78) | | /----------- Tp57577_TGAC_v2_mRNA3425/253-278 (79) |---------------------58---------------------+ | \----------- Tp57577_TGAC_v2_mRNA11050/211-237 (85) | |-------------------------------------------------------- Tp57577_TGAC_v2_mRNA31163/146-170 (80) | |-------------------------------------------------------- Tp57577_TGAC_v2_mRNA10796/188-214 (83) | |-------------------------------------------------------- Tp57577_TGAC_v2_mRNA15108/302-327 (84) | |-------------------------------------------------------- Tp57577_TGAC_v2_mRNA31372/78-103 (90) | \-------------------------------------------------------- Tp57577_TGAC_v2_mRNA31163/197-222 (91) |
Phylogenetic tree for protein ? help Back to Top |
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Subtree rooted at node 74: /----- Tp57577_TGAC_v2_mRNA20997 (2) /-97-+ | \----- Tp57577_TGAC_v2_mRNA30656 (18) /-79-+ | | /----- Tp57577_TGAC_v2_mRNA2716 (3) | \-100+ /--76-+ \----- Tp57577_TGAC_v2_mRNA2688 (43) | | | \--------------- Tp57577_TGAC_v2_mRNA17081 (16) /---------82--------+ | | /----- Tp57577_TGAC_v2_mRNA35829 (17) | \------100------+ | \----- Tp57577_TGAC_v2_mRNA38592 (40) | | /--------------- Tp57577_TGAC_v2_mRNA39745 (4) | | | | /----- Tp57577_TGAC_v2_mRNA15682 (25) | /--82-+ /-97-+ | | | | \----- Tp57577_TGAC_v2_mRNA15693 (26) | | \-94-+ | /-68-+ \---------- Tp57577_TGAC_v2_mRNA35750 (38) | | | | | | /----- Tp57577_TGAC_v2_mRNA11046 (19) | | \------100------+ | | \----- Tp57577_TGAC_v2_mRNA35944 (21) | /-77-+ | | | /----- Tp57577_TGAC_v2_mRNA1902 (5) | | | /-100+ /-88-+ | | | \----- Tp57577_TGAC_v2_mRNA12622 (33) | | | \------100------+ | | /-90-+ \---------- Tp57577_TGAC_v2_mRNA32204 (29) | | | | | | | | /----- Tp57577_TGAC_v2_mRNA6705 (7) | | | | /-100+ | | | | | \----- Tp57577_TGAC_v2_mRNA32075 (15) | | | \---------99---------+ | | | | /----- Tp57577_TGAC_v2_mRNA26320 (8) | | | \-100+ | | | \----- Tp57577_TGAC_v2_mRNA11769 (35) | | | | | | /----- Tp57577_TGAC_v2_mRNA18846 (6) | | | /-100+ | | | | \----- Tp57577_TGAC_v2_mRNA28690 (24) | | |------------60-----------+ | | | \---------- Tp57577_TGAC_v2_mRNA3425 (12) | | | | | |------------------------------------ Tp57577_TGAC_v2_mRNA38522 (9) | \-72-+ /-100-+ |------------------------------------ Tp57577_TGAC_v2_mRNA28977 (10) | | | | | |------------------------------------ Tp57577_TGAC_v2_mRNA14904 (14) | | | | | |------------------------------------ Tp57577_TGAC_v2_mRNA17244 (22) | | | | | | /----- Tp57577_TGAC_v2_mRNA2146 (28) | | |--------------100-------------+ | | | \----- Tp57577_TGAC_v2_mRNA23138 (37) | | | | | | /----- Tp57577_TGAC_v2_mRNA9497 (31) /-58-+ | |--------------100-------------+ | | | | \----- Tp57577_TGAC_v2_mRNA11050 (42) | | | | | | | |------------------------------------ Tp57577_TGAC_v2_mRNA5022 (32) | | | | | | | \------------------------------------ Tp57577_TGAC_v2_mRNA10796 (39) | | | | | | /----- Tp57577_TGAC_v2_mRNA12537 (27) | | \-------------------100------------------+ | | \----- Tp57577_TGAC_v2_mRNA12679 (30) /-55-+ | | | \---------------------------------------------------- Tp57577_TGAC_v2_mRNA38790 (20) | | | | /----- Tp57577_TGAC_v2_mRNA15137 (11) | | /-100+ | | | \----- Tp57577_TGAC_v2_mRNA31372 (23) --78-+ |----------------------64----------------------+ | | \---------- Tp57577_TGAC_v2_mRNA26501 (36) | | | \--------------------------------------------------------- Tp57577_TGAC_v2_mRNA41450 (41) | \-------------------------------------------------------------- Tp57577_TGAC_v2_mRNA31163 (34) Root part of tree: /------------------------------------------------------------------- Tp57577_TGAC_v2_mRNA36721 (1) | |------------------------------------------------------------------- Tp57577_TGAC_v2_mRNA15108 (13) + | /--------------------------------- (74) \----------------85---------------+ \--------------------------------- Tp57577_TGAC_v2_mRNA35100 (44) |