PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM5980
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Subtree rooted at node 78: /---------------------------------------------------- KFK44644.1 [Arabis alpina] (2) | | /----- Cotton_A_40228_BGI-A2_v1.0 [Gossypium arboreum] (3) | /-99-+ | | \----- Gh_A01G0998 [Gossypium hirsutum] (29) | | | /-100+---------- Gorai.002G134800.1 [Gossypium raimondii] (34) | | | | | \---------- Gh_D01G1055 [Gossypium hirsutum] (43) | | | | /---------- Gh_A02G0851 [Gossypium hirsutum] (10) | | | | |-100+ /----- Gorai.005G101400.1 [Gossypium raimondii] (25) | | \-84-+ | | \----- Gh_D02G0901 [Gossypium hirsutum] (32) | /--99-+ | | | /----- Gh_A05G1768 [Gossypium hirsutum] (14) | | | /-100+ | | | | \----- Cotton_A_08673_BGI-A2_v1.0 [Gossypium arboreum] (31) | | | | /-89-+ | |-100+---------- Gh_D05G1962 [Gossypium hirsutum] (37) | | | | | | | /-93-+ | \---------- Gorai.009G214200.1 [Gossypium raimondii] (42) | | | | | | | | | \--------------- Thecc1EG033793t1 [Theobroma cacao] (15) | | | | | | | | /----- Neem_923_f_6 [Azadirachta indica] (5) | | | | /-100+ | | /-98-+ | | \----- Neem_29088_f_1 [Azadirachta indica] (22) | | | | \----100---+ | | | | | /----- Ciclev10002438m [Citrus clementina] (18) | | | | \-100+ | | /-100+ | \----- orange1.1g027928m [Citrus sinensis] (46) | | | | | | | | | \-------------------------- Eucgr.F02320.1.p [Eucalyptus grandis] (41) /-97-+ | /-80-+ | | | | | | \------------------------------- evm.model.supercontig_21.170 [Carica papaya] (28) | | | | | | | | /-100+ \------------------------------------ XP_010538129.1 [Tarenaya hassleriana] (21) | | | | | | | \--93-+ \----------------------------------------- XP_010549248.1 [Tarenaya hassleriana] (17) | | | | | \---------------------------------------------- AA894G00001 [Aethionema arabicum] (36) | | | | /----- 891479 [Arabidopsis lyrata] (4) | | /------100------+ | | | \----- Araha.0722s0001.1.p [Arabidopsis halleri] (33) | | | | | |--------------------- AT1G46480.1 [Arabidopsis thaliana] (8) --82-+ | | | \----------------100----------------+ /---------- Bostr.12302s0137.1.p [Boechera stricta] (13) | | | | | /-50-+ /----- Cagra.1735s0007.1.p [Capsella grandiflora] (26) | | | \-100+ | | | \----- Carubv10010093m [Capsella rubella] (47) | \-100-+ | | /----- Csa03g050720.1 [Camelina sativa] (19) | | | | \----95---+----- Csa14g050900.1 [Camelina sativa] (24) | | | \----- Csa17g071550.1 [Camelina sativa] (39) | \-------------------------------------------------------------- Thhalv10011723m [Eutrema salsugineum] (16) Root part of tree: /------------------------------------------------------------------- 676761034 [Sisymbrium irio] (1) | | /----------- GSBRNA2T00077375001 [Brassica napus] (7) | /----------99---------+ | | \----------- XP_009145045.1 [Brassica rapa] (12) | | | /----100----+ /---------------------- GSBRNA2T00032967001 [Brassica napus] (20) | | | | | | \----100---+ /----------- GSBRNA2T00114682001 [Brassica napus] (23) | | \----100---+ | /----100---+ \----------- XP_013584398.1 [Brassica oleracea] (35) + | | | | | /----------- Rsa1.0_03305.1_g00003.1 [Raphanus sativus] (27) |----81----+ \----------------99---------------+ | | \----------- RrC8563_p1 [Raphanus raphanistrum] (44) | | | \-------------------------------------------------------- Tp1g34210 [Thellungiella parvula] (40) | | /--------------------------------------------- (78) | | | | /----------- GSBRNA2T00095020001 [Brassica napus] (6) | | /----99----+ \----------52---------+ | \----------- XP_009107441.1 [Brassica rapa] (38) | /----54----+ | | | /----------- RrC8923_p2 [Raphanus raphanistrum] (9) | | \----100---+ \----100----+ \----------- Rsa1.0_00174.1_g00010.1 [Raphanus sativus] (11) | | /----------- XP_013602644.1 [Brassica oleracea] (30) \---------100---------+ \----------- GSBRNA2T00071811001 [Brassica napus] (45) |