PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Phylogenetic Tree for OGEM3787
Phylogenetic tree for protein ? help Back to Top |
---|
Subtree rooted at node 107: /--------------------- AA44G00041 [Aethionema arabicum] (2) | | /---------- AT5G07700.1 [Arabidopsis thaliana] (6) /-----------------92----------------+ | | | /-100+ /----- 861189 [Arabidopsis lyrata] (7) | | | \-100+ | \-100-+ \----- Araha.19929s0002.1.p [Arabidopsis halleri] (40) | | | \--------------- Bostr.13129s0196.1.p [Boechera stricta] (60) | | /----- GSBRNA2T00113547001 [Brassica napus] (4) | /-100+ | | \----- XP_009136470.1 [Brassica rapa] (44) | /-100+ | | | /----- GSBRNA2T00040913001 [Brassica napus] (5) | | \-100+ | /----100---+ \----- XP_013593532.1 [Brassica oleracea] (37) | | | | | \--------------- RrC21134_p1 [Raphanus raphanistrum] (47) | | | | /----- XP_009130172.1 [Brassica rapa] (8) | | /-100+ | | | \----- XP_013621594.1 [Brassica oleracea] (18) | | /-100+ | | | | /----- Rsa1.0_00166.1_g00019.1 [Raphanus sativus] (31) | | | \-100+ | /-70-+ /--99-+ \----- RrC4759_p3 [Raphanus raphanistrum] (39) | | | | | | | |-72-+ \--------------- Tp2g24620 [Thellungiella parvula] (22) | | | | | | | \--------------------- 676729700 [Sisymbrium irio] (49) | | | | | | /----- RrC1007_p5 [Raphanus raphanistrum] (11) /-100+ /-70-+ | /-100+ | | | | | | \----- Rsa1.0_00056.1_g00008.1 [Raphanus sativus] (15) | | | | \------100------+ | | | | | /----- XP_013606292.1 [Brassica oleracea] (29) | | | | \-100+ | | | | \----- XP_009111992.1 [Brassica rapa] (35) | | | | | | | \------------------------------- Thhalv10004406m [Eutrema salsugineum] (58) | | | | | | /---------- Bostr.26833s0098.1.p [Boechera stricta] (13) | | /-68-+ | | | | | /-95-+ /----- Csa02g068380.1 [Camelina sativa] (20) | | | | | | | | | | | | \-100+----- Csa11g097210.1 [Camelina sativa] (30) | | | | | | | | | | /--99-+ \----- Csa18g034740.1 [Camelina sativa] (34) | | | | | | | | | | | | /----- Carubv10027861m [Capsella rubella] (36) | | | | | \---100---+ | | /-100+ | | \----- Cagra.0542s0036.1.p [Capsella grandiflora] (42) | | | | \------100-----+ | | | | | /----- 919385 [Arabidopsis lyrata] (16) | | | | | /-100+ | | | | | | \----- Araha.1448s0012.1.p [Arabidopsis halleri] (53) | | /-100-+ | \----100---+ | | | | | \---------- AT5G61420.2 [Arabidopsis thaliana] (17) | | | | | | | | | \----------------------------------------- KFK27899.1 [Arabis alpina] (26) | | | | | \-100+ \---------------------------------------------- AA5G00149 [Aethionema arabicum] (21) --95-+ | | | /---------- XP_010546159.1 [Tarenaya hassleriana] (46) | | | | \-------------------100-------------------+ /----- XP_010547770.1 [Tarenaya hassleriana] (48) | \-99-+ | \----- XP_010523097.1 [Tarenaya hassleriana] (56) | | /----- RrC10287_p1 [Raphanus raphanistrum] (3) | /---100---+ | | \----- Rsa1.0_00816.1_g00003.1 [Raphanus sativus] (14) | | | /-100-+ /----- GSBRNA2T00136149001 [Brassica napus] (25) | | | /-100+ | | | | \----- XP_009122913.1 [Brassica rapa] (55) | | \-67-+ | /-89-+ | /----- XP_013609260.1 [Brassica oleracea] (27) | | | \-100+ | | | \----- GSBRNA2T00092496001 [Brassica napus] (28) | /-88-+ | | | | \--------------------- Tp6g35210 [Thellungiella parvula] (54) | | | | | \-------------------------- 676744340 [Sisymbrium irio] (38) | | | | /----- GSBRNA2T00129660001 [Brassica napus] (24) | /-100+ /-100+ | | | | \----- XP_009131005.1 [Brassica rapa] (52) | | | /-100+ | | | | | /----- GSBRNA2T00134508001 [Brassica napus] (43) | | | | \-100+ | | \------100------+ \----- XP_013626588.1 [Brassica oleracea] (59) \------------60-----------+ | | | /----- Rsa1.0_00661.1_g00001.1 [Raphanus sativus] (33) | \---100---+ | \----- RrC558_p5 [Raphanus raphanistrum] (41) | | /----- KFK25152.1 [Arabis alpina] (10) \--------------72--------------+ \----- Thhalv10013952m [Eutrema salsugineum] (57) Root part of tree: /------------------------------------------------------------------- Cagra.2925s0017.1.p [Capsella grandiflora] (1) | |------------------------------------------------------------------- Carubv10001328m [Capsella rubella] (32) | | /--------------------------------- (107) | | | /----100----+ /---------------------- AT5G07690.1 [Arabidopsis thaliana] (9) + | | | | | \----100---+ /----------- 487604 [Arabidopsis lyrata] (45) | /----100---+ \----100---+ | | | \----------- Araha.19929s0001.1.p [Arabidopsis halleri] (51) | | | | | \--------------------------------------------- Bostr.13129s0197.1.p [Boechera stricta] (50) \----100---+ | /----------- Csa20g010130.1 [Camelina sativa] (12) | /----86----+ | | \----------- Csa08g056690.1 [Camelina sativa] (23) \---------------100---------------+ \---------------------- Csa13g009720.1 [Camelina sativa] (19) |