PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM2823
Phylogenetic tree for protein ? help Back to Top |
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Subtree rooted at node 106: /------------------------------------ AA93G00134 [Aethionema arabicum] (2) | | /--------------------- 676765124 [Sisymbrium irio] (5) | | | | /----- Rsa1.0_07731.1_g00003.1 [Raphanus sativus] (10) | | /-100+ | | | \----- RrC28592_p1 [Raphanus raphanistrum] (63) | | /-99-+ | /-76-+ | \---------- RrC10839_p3 [Raphanus raphanistrum] (64) | | |--94-+ | | | \--------------- GSBRNA2T00111726001 [Brassica napus] (49) | | | | | | /----- RrC1415_p2 [Raphanus raphanistrum] (55) | | \-------71------+ | | \----- Rsa1.0_00339.1_g00013.1 [Raphanus sativus] (59) | | | |-------------------------- Tp3g08080 [Thellungiella parvula] (7) | | | |-------------------------- Cagra.2515s0064.1.p [Capsella grandiflora] (14) | | | |-------------------------- XP_013584105.1 [Brassica oleracea] (18) /-100+ | | | |-------------------------- Carubv10015035m [Capsella rubella] (22) | | | | | | /----- Rsa1.0_00131.1_g00058.1 [Raphanus sativus] (23) | | | /-76-+ | | | | \----- RrC2697_p4 [Raphanus raphanistrum] (57) | | | | | | |-------76------+---------- GSBRNA2T00072858001 [Brassica napus] (25) | | | | | | /-56-+ \---------- GSBRNA2T00018619001 [Brassica napus] (68) | | | | | | | |-------------------------- XP_009146906.1 [Brassica rapa] (27) | | | | | | | |-------------------------- GSBRNA2T00073238001 [Brassica napus] (30) | | | | | | | | /--------------- KFK38361.1 [Arabis alpina] (31) | | | | | | | | | | /---------- Bostr.22252s0094.1.p [Boechera stricta] (39) | | | | | | | | | | |-99-+ /----- Csa19g013190.1 [Camelina sativa] (42) | | | | | | | | \-100+ |----94----+ \-100+----- Csa01g010530.1 [Camelina sativa] (48) | | | | | | | | | \----- Csa15g011150.1 [Camelina sativa] (69) /-95-+ | | | | | | | | /----- AT3G09735.1 [Arabidopsis thaliana] (47) | | | | \----90---+ | | | | \----- 478296 [Arabidopsis lyrata] (60) | | | | | | | |-------------------------- GSBRNA2T00080704001 [Brassica napus] (34) | | | | | | | \-------------------------- GSBRNA2T00125142001 [Brassica napus] (43) | | | | | \------------------------------- Thhalv10021874m [Eutrema salsugineum] (20) | | | | /--------------- Eucgr.A01168.1.p [Eucalyptus grandis] (3) | | | | | | /----- Ciclev10013218m [Citrus clementina] (13) | | /---------51---------+ /-100+ | | | | | \----- orange1.1g044991m [Citrus sinensis] (62) | | | \-71-+ | | | \---------- evm.model.supercontig_638.2 [Carica papaya] (52) | | | | | | /-------------------------- Gh_A09G1416 [Gossypium hirsutum] (6) /-100-+ | | | | | | | | /----- Gh_D04G1104 [Gossypium hirsutum] (24) | | | | | /-92-+ | | \-100+ | | \----- Gorai.009G419300.1 [Gossypium raimondii] (29) | | | | /-74-+ | | | /-100+ | \---------- Gh_A04G0641 [Gossypium hirsutum] (56) | | | | | | | | | | | /--99-+ /----- Cotton_A_00448_BGI-A2_v1.0 [Gossypium arboreum] (38) | | | | | | | | | | | | | | | |----- Gh_D01G2094 [Gossypium hirsutum] (46) | | | | | | \---100---+ | | \-97-+ \-99-+ |----- Gorai.002G249300.1 [Gossypium raimondii] (53) | | | | | | | | | \----- Gh_A01G1853 [Gossypium hirsutum] (67) /-59-+ | | | | | | | \--------------------- Thecc1EG022113t1 [Theobroma cacao] (66) | | | | | | | \------------------------------- Neem_783_f_2 [Azadirachta indica] (36) | | | | | \---------------------------------------------- XP_010528106.1 [Tarenaya hassleriana] (51) | | | |---------------------------------------------------- 323881 [Arabidopsis lyrata] (11) | | | |---------------------------------------------------- AT3G53370.1 [Arabidopsis thaliana] (33) | | | |---------------------------------------------------- Bostr.11793s0058.1.p [Boechera stricta] (45) | | | \---------------------------------------------------- Araha.11825s0008.1.p [Arabidopsis halleri] (65) | | /----- GSBRNA2T00129478001 [Brassica napus] (9) | /-97-+ /-50-+ | \----- XP_009116029.1 [Brassica rapa] (50) | | | | | /-100+---------- GSBRNA2T00019926001 [Brassica napus] (40) | | | | | | | \---------- XP_013600217.1 [Brassica oleracea] (58) | |--------------------80-------------------+ | | | /---------- XP_009139421.1 [Brassica rapa] (12) | | | | | | \-100+ /----- XP_013613777.1 [Brassica oleracea] (26) | | \-95-+ | | \----- XP_013613779.1 [Brassica oleracea] (61) | | | | /----- Thhalv10010878m [Eutrema salsugineum] (16) | |-------------------------56------------------------+ | | \----- Tp5g08980 [Thellungiella parvula] (41) --100+ | | | /----- Rsa1.0_01134.1_g00014.1 [Raphanus sativus] (19) | \-------------------------95------------------------+ | \----- RrC3226_p3 [Raphanus raphanistrum] (35) | |-------------------------------------------------------------- XP_013590178.1 [Brassica oleracea] (15) | | /----- Rsa1.0_07942.1_g00001.1 [Raphanus sativus] (17) |---------------------------97---------------------------+ | \----- RrC14186_p2 [Raphanus raphanistrum] (44) | |-------------------------------------------------------------- XP_009103859.1 [Brassica rapa] (21) | |-------------------------------------------------------------- GSBRNA2T00071285001 [Brassica napus] (32) | \-------------------------------------------------------------- GSBRNA2T00062878001 [Brassica napus] (54) Root part of tree: /------------------------------------------------------------------- Csa06g039810.1 [Camelina sativa] (1) | |------------------------------------------------------------------- Csa05g016730.1 [Camelina sativa] (8) | + /---------------------- (106) | /----------76----------+ | | \---------------------- Tp4g19440 [Thellungiella parvula] (4) \----------97---------+ | /---------------------- AT2G37120.1 [Arabidopsis thaliana] (28) \----------76----------+ \---------------------- 902847 [Arabidopsis lyrata] (37) |