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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM3493
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Subtree rooted at node 107: /---------------------------------------------- AA53G00003 [Aethionema arabicum] (2) | | /--------------- RrC2888_p2 [Raphanus raphanistrum] (3) | | | | /----- XP_013595821.1 [Brassica oleracea] (24) | /-100-+ /-100+ | | | | \----- GSBRNA2T00105754001 [Brassica napus] (47) | | \-100+ | | | /----- XP_009102667.1 [Brassica rapa] (44) | | \-100+ | | \----- GSBRNA2T00128453001 [Brassica napus] (59) | | | | /----- XP_013584442.1 [Brassica oleracea] (11) | | /-100+ | | | \----- GSBRNA2T00093246001 [Brassica napus] (35) | | /-100+ | /------100-----+ | | /----- XP_009114993.1 [Brassica rapa] (22) | | | | \-100+ | | |-100-+ \----- GSBRNA2T00113874001 [Brassica napus] (43) | | | | /-100-+ | | | /----- RrC7564_p1 [Raphanus raphanistrum] (19) | | | | \---100---+ | | | | \----- Rsa1.0_00459.1_g00004.1 [Raphanus sativus] (54) | | | | | | | |--------------------- Tp1g27130 [Thellungiella parvula] (12) | | | | | | | \--------------------- 676770646 [Sisymbrium irio] (45) | | | | | | /----- Csa14g039320.1 [Camelina sativa] (15) | | | /-69-+ | | /-100+ | \----- Csa14g039330.1 [Camelina sativa] (33) | | | | /-98-+ | | | | | \---------- Csa03g034750.1 [Camelina sativa] (37) | | | | /-100-+ | | | | | \--------------- Csa17g048880.1 [Camelina sativa] (34) | | | | /-100+ | | | | | | /----- Carubv10012336m [Capsella rubella] (41) | | | | | \------100------+ | | | | | \----- Cagra.1508s0062.1.p [Capsella grandiflora] (48) | \-100+ | /-100+ /-100+ | | | | /---------- Bostr.15697s0445.1.p [Boechera stricta] (25) | | | | | | | | | | | | \-------65------+ /----- 313994 [Arabidopsis lyrata] (55) | | | \-100+ \-100+ | | | | \----- AT1G31310.1 [Arabidopsis thaliana] (60) | | | | | | | \------------------------------- Thhalv10007862m [Eutrema salsugineum] (27) | | | | | \----------------------------------------- KFK44903.1 [Arabis alpina] (5) | | | | /----- 676788192 [Sisymbrium irio] (6) | | /-100+ | | | \----- Tp4g17890 [Thellungiella parvula] (23) | | /-78-+ | | | \---------- KFK36461.1 [Arabis alpina] (58) | | /-------93------+ | | | \--------------- Thhalv10016925m [Eutrema salsugineum] (20) /-99-+ | | | | | | /----- AT2G35640.1 [Arabidopsis thaliana] (16) | | | | /---------100--------+ | | \---------100--------+ | \----- 345299 [Arabidopsis lyrata] (18) | | | | | | | | /---------- Csa04g049030.1 [Camelina sativa] (17) | | | | | | | \-100+ /-100+ /----- Csa05g018570.1 [Camelina sativa] (39) | | | | \-98-+ | | | /-100-+ \----- Csa06g038200.1 [Camelina sativa] (51) | | | | | | | \-100+ \--------------- Carubv10023521m [Capsella rubella] (52) | | | | | \--------------------- Bostr.23794s0534.1.p [Boechera stricta] (36) | | | | /----- XP_010518983.1 [Tarenaya hassleriana] (28) | \------------------------100------------------------+ | \----- XP_010540683.1 [Tarenaya hassleriana] (62) --100+ | /--------------- Cotton_A_37864_BGI-A2_v1.0 [Gossypium arboreum] (4) | | | /-100-+ /---------- Gh_A01G1188 [Gossypium hirsutum] (13) | | | | | | \-91-+ /----- Gorai.002G169000.1 [Gossypium raimondii] (29) | /-100+ \-97-+ | | | \----- Gh_D01G1355 [Gossypium hirsutum] (53) | | | | /-100+ \--------------------- Thecc1EG011136t1 [Theobroma cacao] (32) | | | | /-97-+ \-------------------------- evm.model.supercontig_2.95 [Carica papaya] (61) | | | | /-75-+ \------------------------------- Eucgr.D01036.1.p [Eucalyptus grandis] (14) | | | | | \------------------------------------ evm.model.supercontig_192.2 [Carica papaya] (49) | | \---------60---------+ /----- orange1.1g040756m [Citrus sinensis] (9) | /-100+ | | \----- Ciclev10017689m [Citrus clementina] (40) \--------------99--------------+ \---------- Neem_10073_f_1 [Azadirachta indica] (46) Root part of tree: /------------------------------------------------------------------- Gh_D05G1379 [Gossypium hirsutum] (1) | |------------------------------------------------------------------- Gorai.009G150000.1 [Gossypium raimondii] (8) | | /--------------------------------- (107) | | | | /----------- Gorai.011G050400.1 [Gossypium raimondii] (26) | /-----89----+ /----100---+ | | | | \----------- Gh_D10G0445 [Gossypium hirsutum] (50) | | \----100---+ + | | /----------- Gh_A10G0429 [Gossypium hirsutum] (56) | | \----100---+ | | \----------- Cotton_A_08607_BGI-A2_v1.0 [Gossypium arboreum] (57) | | | /----100---+ /----------- Gorai.010G171500.1 [Gossypium raimondii] (7) | | | /----100---+ | | | | \----------- Gh_D06G1550 [Gossypium hirsutum] (38) | | | /----100---+ | | | | | /----------- Cotton_A_34013_BGI-A2_v1.0 [Gossypium arboreum] (21) | | | | \----100---+ \----100---+ \-----99----+ \----------- Gh_A06G1228 [Gossypium hirsutum] (42) | | | \--------------------------------- Thecc1EG029325t1 [Theobroma cacao] (31) | | /----------- Cotton_A_35310_BGI-A2_v1.0 [Gossypium arboreum] (10) \---------------------100--------------------+ \----------- Gh_A05G1202 [Gossypium hirsutum] (30) |