PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM10280
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Subtree rooted at node 55: /----- orange1.1g038867m [Citrus sinensis] (2) /---------------------------100--------------------------+ | \----- Ciclev10019039m [Citrus clementina] (19) | | /----- XP_009136082.1 [Brassica rapa] (3) | /-100+ | | \----- GSBRNA2T00154921001 [Brassica napus] (10) | /-100+ | | | /----- GSBRNA2T00085286001 [Brassica napus] (8) | | \-100+ | | \----- XP_013627290.1 [Brassica oleracea] (15) | /-100-+ | | | /----- Rsa1.0_03969.1_g00001.1 [Raphanus sativus] (4) | | | /-100+ | | | | \----- RrC9576_p1 [Raphanus raphanistrum] (21) | /-78-+ \-100+ | | | \---------- Rsa1.0_03187.1_g00001.1 [Raphanus sativus] (16) | | | | /-95-+ \--------------------- KFK39784.1 [Arabis alpina] (6) | | | | /-86-+ \-------------------------- Tp3g22420 [Thellungiella parvula] (17) | | | | | \------------------------------- Thhalv10003110m [Eutrema salsugineum] (11) | | --100+ | /----- Csa01g030760.1 [Camelina sativa] (7) | | /-52-+ | | | \----- Csa15g050420.1 [Camelina sativa] (29) | | /-100+ | /-95-+ | \---------- Csa19g036630.1 [Camelina sativa] (26) | | | /-100-+ | | | | | /----- Cagra.2774s0002.1.p [Capsella grandiflora] (24) | | | | \---100---+ | | | /-98-+ \----- Carubv10016094m [Capsella rubella] (31) | | | | | | /-90-+ | | \--------------------- Bostr.19424s0154.1.p [Boechera stricta] (14) | | | \---100---+ | | | | /----- AT3G24650.1 [Arabidopsis thaliana] (9) | | | \---------100--------+ | | | \----- 342636 [Arabidopsis lyrata] (13) | /--99-+ | | | | \----------------------------------------- AA109G00007 [Aethionema arabicum] (30) | | | | | | /----- XP_010532867.1 [Tarenaya hassleriana] (18) | /-80-+ \-------------------99-------------------+ | | | \----- XP_010527216.1 [Tarenaya hassleriana] (25) | | | | | | /----- EcS606847.10 [Eucalyptus camaldulensis] (5) \-97-+ \----------------------66----------------------+ | \----- Eucgr.H00815.1.p [Eucalyptus grandis] (12) | \--------------------------------------------------------- evm.model.supercontig_8.187 [Carica papaya] (22) Root part of tree: /------------------------------------------------------------------- Gorai.001G184300.1 [Gossypium raimondii] (1) | |------------------------------------------------------------------- Gh_D07G1550 [Gossypium hirsutum] (23) | + /---------------------- (55) | /----------100---------+ | | \---------------------- Thecc1EG003056t1 [Theobroma cacao] (20) \---------100---------+ | /---------------------- Gh_A07G2239 [Gossypium hirsutum] (27) \----------100---------+ \---------------------- Cotton_A_33861_BGI-A2_v1.0 [Gossypium arboreum] (28) |